Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GWCH70_0382 |
Symbol | |
ID | 7977491 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacillus sp. WCH70 |
Kingdom | Bacteria |
Replicon accession | NC_012793 |
Strand | + |
Start bp | 439708 |
End bp | 441366 |
Gene Length | 1659 bp |
Protein Length | 552 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644797370 |
Product | thiamine pyrophosphate protein |
Protein accession | YP_002948570 |
Protein GI | 239825946 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAACAGA CGATCCGAAA CACCACCGCG GCGAAAGCAA TCGTTCATTG CTTAAAACGA GAGGGTATTT CCCATTTGTT TTGCGTGCCG GGAGAAAGCT ATTTGCCGCT GATGGATGCC ATTTTCGATG AACCTTCGCT TCAACTGATT TCGGCCCGCC ATGAAGGAGG CGCTTCGTTT ATGGCGGAAG GTTATGCAAA AGCGTCAGGG AAACCCGGAG TCGTGCTGGC GACGCGGGGA GTCGGCGGCG CTAACTTAGC GATTGGTGTC CATACGGCGA GGCAAGATTC CACGCCGATG GTCGTATTTT TAGGGCAAGT ACACAGCCAT TTTCGCGGCA GGGAAGGATT TCAGGAAGTC GATTTAGACC GGTTTTTCCA GCCGATTGCA AAATGGACGG TGGAAATTCG CGAGGCGGAG CGAATACCCG AGCTGGTGCA GCGGGCGTTT CGCATCGCCA AAACGGGCAG GCCAGGTCCT GTTGTCATTT CGCTTCCGGA AGATATATTT CTTCAAGATA TTGCCGAAGC GGTCATTTCG AATGTAGATA TACCGAGACC TGCTCCAAGC ACAGAGGATG TGCGGAGCGT GCAGGAAATA TTGCAAAGGG CGAAACGGCC GGTTGTCATC GCCGGCGGAG GAGTAAAGCT GGCTAAAGCG GAACAGCTGT TGCGGTTATT TGCTGAAAAA TATTCCATTC CTGTGGCGGC TGCTTTCCGC CGCCATGATG TGTTCCCCAA TGATCATCCG CTTTATGTCG GCCATCTTGG ATTAGGAACG CCGAAATCCA TTATCGAGAC AGTGAAGCAG GCCGATGTCG TGATCGCGAT CGGGACGAGA TTATCGGAAG TGACGACGCA AGATTATCGC TTGCTGTCAT CGGATCAGAC GCTCATTCAT ATCGATATCG ACAGCGATGT ATTAGGAAAA GTATATCCAC CGGACATTTC CATCCTAGCA GATTGCAAAG AAACGCTCTT AAAATTGCTA AAAATCGTTG TGCAGCCGTC TTGGCGCGAT TGGGTAGCAG CAAGGAGGAA ACAATATGAA CAAGTATCGA TACTTCCGGT GGAAAAACGG AATTTAAATG AAGCGATTAT CGCCAGCCTG CAAGAACATT TGCCAAACAA TTCGATCATT ACGAATGATG CTGGCAATTT CGCCGGCTGG CTCCATGCCT TTTTCCAGTT TACCGAAGAG CATACGTATA TCGGCCCTAC TTCCGGGGCG ATGGGATATG GCATGCCTGC AGCGATTGGC GCCAAGCTTG CTTTCCCGGA GCGCGTTGTC GTTTCTCTAT CAGGAGACGG CGGTTTTATG ATGACAGTGC AGGAGTTAGA AACAGCTGCT AGATATGAAA TTCCTATTAT TAGTGTTGTT TTTAATAACC GCATGTATGG AACGATCCGG ATGCATCAAG AACTGCATTT TCCAAAGCGA GTCATCGGAA CAGATTTAGG GAATGTATCA TTTGCGGAAT TGGCTAAATG CTTAAATGGC AACGGCATTC AAGTAGAAAC GGAACAGCAA TTTACCGAAA CGCTCCTTCA ATCTCTCCAT GCAAAGAAAC CTACGGTCAT AGAAGTACTG ACGGATCCAA ATCAAATTTC CGTGACGGCA ACGATCGCTG AGTTGCGAAA ACGATCGAAT TCTGTATAA
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Protein sequence | MKQTIRNTTA AKAIVHCLKR EGISHLFCVP GESYLPLMDA IFDEPSLQLI SARHEGGASF MAEGYAKASG KPGVVLATRG VGGANLAIGV HTARQDSTPM VVFLGQVHSH FRGREGFQEV DLDRFFQPIA KWTVEIREAE RIPELVQRAF RIAKTGRPGP VVISLPEDIF LQDIAEAVIS NVDIPRPAPS TEDVRSVQEI LQRAKRPVVI AGGGVKLAKA EQLLRLFAEK YSIPVAAAFR RHDVFPNDHP LYVGHLGLGT PKSIIETVKQ ADVVIAIGTR LSEVTTQDYR LLSSDQTLIH IDIDSDVLGK VYPPDISILA DCKETLLKLL KIVVQPSWRD WVAARRKQYE QVSILPVEKR NLNEAIIASL QEHLPNNSII TNDAGNFAGW LHAFFQFTEE HTYIGPTSGA MGYGMPAAIG AKLAFPERVV VSLSGDGGFM MTVQELETAA RYEIPIISVV FNNRMYGTIR MHQELHFPKR VIGTDLGNVS FAELAKCLNG NGIQVETEQQ FTETLLQSLH AKKPTVIEVL TDPNQISVTA TIAELRKRSN SV
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