Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GWCH70_0094 |
Symbol | |
ID | 7977493 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacillus sp. WCH70 |
Kingdom | Bacteria |
Replicon accession | NC_012793 |
Strand | + |
Start bp | 119822 |
End bp | 120472 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644797068 |
Product | RNA polymerase factor sigma-70 |
Protein accession | YP_002948300 |
Protein GI | 239825676 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02859] RNA polymerase sigma-H factor [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000000196498 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTGCGATT GCTTCAAAGA AAAAACATAT AAAAACTATA AACATTTGGA AGATGAGCAA TTAGTTGAAC TTGTGCATCA AGGGGATGGA GATGCGCTAG ATTTTTTGAT TCATAAGTAT CAAAATTTTG TACGTGCCAA AGCGCGTTCT TATTTTTTAG TCGGCGCCGA TCGGGAAGAT ATCATTCAAG AAGGAATGAT TGGTTTATAT AAGGCGGTTC GCGATTTTAA AGGGGACAAG CTTTCCTCTT TTAAAGCGTT TGCAGAACTT TGTATTACAA GACAGATGAT CACTGCAATT AAAACAGCGA CAAGACAAAA ACATATTCCG CTTAATTCTT ATATATCTTT GGATAGACCT ATTTATGATG ATGAATCAGA CCGGACGCTG ATGGATGTCA TTTCTGGAAC GAAAGCGATG GATCCAGAAG AACTGATCGT CAATCGCGAG GAAGTCGATG ATATCGAGGT GAAAATGACC GAACTGCTCA GCGATTTGGA GCGGAAAGTG CTTGCTTTAT ATTTAGATGG TCGCTCATAT CAAGAAATTT CTGAAGAGCT AAATCGCCAT GTCAAATCGA TTGATAACGC CCTTCAGCGC GTAAAAAGAA AACTGGAAAA ATATTTGGAA TATCGTGAAA TTAGTCTTTA G
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Protein sequence | MCDCFKEKTY KNYKHLEDEQ LVELVHQGDG DALDFLIHKY QNFVRAKARS YFLVGADRED IIQEGMIGLY KAVRDFKGDK LSSFKAFAEL CITRQMITAI KTATRQKHIP LNSYISLDRP IYDDESDRTL MDVISGTKAM DPEELIVNRE EVDDIEVKMT ELLSDLERKV LALYLDGRSY QEISEELNRH VKSIDNALQR VKRKLEKYLE YREISL
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