| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_0086 |
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| Symbol | ispD |
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| ID | 7978537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacillus sp. WCH70 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012793 |
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| Strand | + |
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| Start bp | 112920 |
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| End bp | 113606 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644797060 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_002948292 |
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| Protein GI | 239825668 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000836739 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATGTATG AGGTAGTCAT TCCTGCAGCC GGGCAAGGAA AGCGAATGAA GGCAGGAGTT
AATAAACAAT TGATTGAACT TCAAAACGAA CCGCTAATTG TGCGCACATT AAAAGTGTTT
GAAAACGATG AATGGTGCCG TGGTATTATT GTTGTGATTA ATGAAGCGGA AAGAACACAG
TTTGAACAAT TATTTTCTCG TTTCCATATT AAAAAAATCA CTGCGATCGT AAGCGGTGGA
AAAGAGCGAC AACATAGCGT GTACAATGGA CTGAAAGCGG TGAAAAATGG GGATATTGTG
CTTATTCATG ATGGTGCGCG TCCGTTCGTT ACTATAGAGC ACATTCATGA ATTAGTAAAA
GAAGCGAAGG AACACGGTGC GGCAATTCCG GCTGTGCGCG TTAAAGACAC TATCAAAAAG
GCGCGCGATC AGTTTGTTGA GGAAACGGTG GAACGCTCTA GCTTGTGGGC TGTACAAACT
CCACAAGCTT TTCATGTTTC TCTCGTTTTA AGGGCACATG AGCAGGCACA AAAAGATGGT
TATATTGGCA CAGATGATGC AAGTCTTGTA GAGCGAATTG GCGGGAAAGT AAAAATTGTC
GAAGGCGATT ACCGCAATAT TAAATTAACG ACACCGGATG ATTTATTATT TGCTGAAGCG
ATTTTATCAA GTTGGGTAAT TTCATAA
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| Protein sequence | MMYEVVIPAA GQGKRMKAGV NKQLIELQNE PLIVRTLKVF ENDEWCRGII VVINEAERTQ
FEQLFSRFHI KKITAIVSGG KERQHSVYNG LKAVKNGDIV LIHDGARPFV TIEHIHELVK
EAKEHGAAIP AVRVKDTIKK ARDQFVEETV ERSSLWAVQT PQAFHVSLVL RAHEQAQKDG
YIGTDDASLV ERIGGKVKIV EGDYRNIKLT TPDDLLFAEA ILSSWVIS
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