Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU3417 |
Symbol | |
ID | 2686608 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 3759521 |
End bp | 3761050 |
Gene Length | 1530 bp |
Protein Length | 509 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637128112 |
Product | dioxygenase, putative |
Protein accession | NP_954457 |
Protein GI | 39998506 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3670] Lignostilbene-alpha,beta-dioxygenase and related enzymes |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAGAA GGGACTTCCT TAAAACCGCC GGACTGACCG GCATCGCCCT GGGGCTCCCC GGCTGCGCCC GGAGCCTCCC CTTCGGCCGG GACGTCTTTC CCGACTTCGG TGACGATGCC CGCCCCTACC TGGGGCTTGC CACGTCGCTG CGGGAGGAGC ACGACTACGA GGCCCGGGTG GAAGGAACCA TCCCCGCGGG GCTGCGCGGC ACCCTCTACC GCAACGGCCC GGCCCTCTTC GATCGGGGTG GGATGCGCAA GCGGACCCTC CTGGACGGGG ACGGCATGGT GCAGGCGTTC CGTTTCGGCG ACCGTGGGAT CAGATATGCG AACCGCTTCG TGCGGACCCG GAAATTCGTG GAAGAAGAGG CTGCCGGCCG CTTCCTCCAT CCCACCTGGA GCACCCAGGC CCCCGGCGGA ATCTGGACCA ACGTCTGGCC CACGGAGCGG CTCCTGAGCC AGGCGGGGAT TACGGTCTTC CCGTGGCGGG GACGGCTTTA CGCCTTCGAC GAATCATCTT TCCCCTACGA ACTGGACCCG GATACCCTGG CAACCGTGGG CGAAACCACC TTTGGCCTGC CGCGCGACCT CACCACTTAC TCGGCCCATG GCAAGTTCGA CCCGGTCACG GGAGAATGGC TCCACTTCGG CATCCGCTAC GGCCCCCGAA CCTTTGTCCA CCTGACCACC TTCAATGCGG ACGGCACCCT CCGCCGCCAC CGGGCCCTGG AGCTTCCCCG CGCGATCTAC ATGCACGACT GGTTCGTAAC CGAGCGCCAC GTGGTGTTCC ACCTCCACCC GGTGGAAATC GCCTACTGGC CCTTCCTGCT CGGCATCCGG AGCATGGCCG AATCCCTCCG CTGGCGCCCC GAACGGGGAA CGATCCTCAT GGTGGCGGAG CGGGACGGCG AGGCGCCGCC ACGCCTGGTG GAAACCGAGG CATGCTATCT CTGGCACACC TTCAACGCGT GGGAAGAACG AGGGAAAATC ACTGCCGACT TCGTGGGGTA CCGCAACCCG GACCATTTCA TCAGCGACGA TCCGGTCATA ACCGCGGTCA TGCTGGGACG GCGGGGAACC TATTCCTATC CCGGCGAGGT CATGCGCTAC CGGATCGATC CGGCCAGGGG AACGGCCGCC CGCGAGGTGC TCCATCAGGG GAGCTGCGAG TGGCCCCGCA TCGACGAGCG GCTCCGTTGC CGCCCACACC GCACGGGGTA CATGCTCCGC TGCCTTCCCG GCGAATTCTT TTGGTCAATC GTCATGGGGC TCGACCCGGT TACCGGCCGC ACCGACGAGT ACAGCTTCGG CCGGGGCGTC TACTGCACCG AGCCGGTCTT CGCGCCGCGG CCCGACACCC TCGCCGGCGG CCCCGGCTGG CTCCTGGTCG AACTCTATGA CAGCCGCACC CGCACCAGTT CACTGGCCAT CCTCGACGCC GACAGGATCG CCGATGGCCC CCTGGCCCTC GTTCGACTCA CCCACCACGT CCCCTTCAGT TACCACGGCT GGTGGCAGCC TGCTTCTTAG
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Protein sequence | MNRRDFLKTA GLTGIALGLP GCARSLPFGR DVFPDFGDDA RPYLGLATSL REEHDYEARV EGTIPAGLRG TLYRNGPALF DRGGMRKRTL LDGDGMVQAF RFGDRGIRYA NRFVRTRKFV EEEAAGRFLH PTWSTQAPGG IWTNVWPTER LLSQAGITVF PWRGRLYAFD ESSFPYELDP DTLATVGETT FGLPRDLTTY SAHGKFDPVT GEWLHFGIRY GPRTFVHLTT FNADGTLRRH RALELPRAIY MHDWFVTERH VVFHLHPVEI AYWPFLLGIR SMAESLRWRP ERGTILMVAE RDGEAPPRLV ETEACYLWHT FNAWEERGKI TADFVGYRNP DHFISDDPVI TAVMLGRRGT YSYPGEVMRY RIDPARGTAA REVLHQGSCE WPRIDERLRC RPHRTGYMLR CLPGEFFWSI VMGLDPVTGR TDEYSFGRGV YCTEPVFAPR PDTLAGGPGW LLVELYDSRT RTSSLAILDA DRIADGPLAL VRLTHHVPFS YHGWWQPAS
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