Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU3380 |
Symbol | gatB |
ID | 2688212 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 3715702 |
End bp | 3717141 |
Gene Length | 1440 bp |
Protein Length | 479 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637128074 |
Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
Protein accession | NP_954420 |
Protein GI | 39998469 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACTATC AGGCCGTCAT TGGTTTAGAA GTCCACGTCC AGCTGAAGAC CGACACCAAG ATCTTCTGCG GCTGCTCCAC AACGTTCGGT GCTTCGCCCA ACTCCCAGAC CTGCCCTGTC TGCCTCGGCA TGCCGGGGGT CCTGCCGGTG CTCAACAAGA AGGTGGTGGA GTTCGCCATC AGGGCCGGCC TGGCCACCAA CTGCCGGATC GCGCCCCGCT CGGTCTTCGC CCGGAAGAAC TATTTCTACC CGGACTTGCC CAAGGGTTAC CAGATCAGCC AGTACGAGCT CCCCATCTGC CAGAATGGAC ACCTGGACAT CGAGGTGGAT GGTCAGGTGA AGCGGATCGG CATTACCCGC ATCCACATGG AGGAGGATGC CGGCAAGCTG GTGCACGCCG ACGTCCCCGG CCTGGGGAGC GGTTCCGGCG TGGACCTGAA TCGCGCCTGC ACGCCGCTGC TGGAGATCGT CTCGGAACCG GACATCCGCA GTGCCGACGA GGCTGTGGCC TATCTCAGGA AGCTCCACCA GATCGTGGTC TACCTGGGTA TCTGCGATGG CAACATGGAA GAGGGGAGCT TCCGCTGCGA TGCCAACGTG TCGGTCATGC CCGTGGGCTC CACGACCTTC GGCACCCGTA CCGAGACCAA AAACGTAAAC TCGTTCCGCT TCGTGAAGCA GGCCATCGAG CACGAGATAG AGCGGCAGAT CGAGCTGATC GAAGAGGGAG GGAAGGTGGT GCAGGAGACC CGCCTCTTCG ATCCGAATAC CGGTGAAACT CGCTCCATGC GCGGCAAGGA GGAGGCCCAC GACTACCGCT ACTTCCCCGA CCCCGACCTG GTGCCGCTGG TCATCTCAAA CGACTGGGTC GAGGATACGC GCCTCTCCCT CCCGGAACTC CCCGATGCGC GGCGGAGCCG CTACCGCTCC GAGCTGGGGC TTTCCGACTA CGACGCCGAG GTCCTCACCG CTACCCGGGA GATGGCCGAG TACTTCGAAA ACTGCCTTGC CGCGGGCGCC CCGGCCAAGG GGGCGGCCAA CTGGGTGATG GGAGAGGTGA CTCGCGCCCT GAACGAGGCT GGCAAGGACA TCGCCGAATG CCCGGTTGCT CCGGCCCGTC TCACGGCGCT GCTGCAACTG ATCGAGAAGG GCACCATCTC CGGCAAGATC GCCAAGACCG TCTTCGATGA GATGTGGCAA AGCGACAAGG CCCCGGAGGC CATCGTGGAG GAGAAGGGGC TCGTCCAGGT CTCCGACACC GGGGCCATCG AGAAGATCAT CGACGAGATC ATGGCCGCCA ACATGGGCCA GGTTGAGGAG TTCCGCGGCG GCAAGGAGAA GGTCTTCGGC TTCTTCGTGG GCCAGGTGAT GCGGGCCTCC AAGGGGAAGG CCAACCCGGC GGTGGTGAAT GAGCTGCTGA TGAAGAAGCT GAAAGGCTAA
|
Protein sequence | MNYQAVIGLE VHVQLKTDTK IFCGCSTTFG ASPNSQTCPV CLGMPGVLPV LNKKVVEFAI RAGLATNCRI APRSVFARKN YFYPDLPKGY QISQYELPIC QNGHLDIEVD GQVKRIGITR IHMEEDAGKL VHADVPGLGS GSGVDLNRAC TPLLEIVSEP DIRSADEAVA YLRKLHQIVV YLGICDGNME EGSFRCDANV SVMPVGSTTF GTRTETKNVN SFRFVKQAIE HEIERQIELI EEGGKVVQET RLFDPNTGET RSMRGKEEAH DYRYFPDPDL VPLVISNDWV EDTRLSLPEL PDARRSRYRS ELGLSDYDAE VLTATREMAE YFENCLAAGA PAKGAANWVM GEVTRALNEA GKDIAECPVA PARLTALLQL IEKGTISGKI AKTVFDEMWQ SDKAPEAIVE EKGLVQVSDT GAIEKIIDEI MAANMGQVEE FRGGKEKVFG FFVGQVMRAS KGKANPAVVN ELLMKKLKG
|
| |