| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU3363 |
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| Symbol | |
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| ID | 2688233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | + |
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| Start bp | 3694820 |
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| End bp | 3697111 |
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| Gene Length | 2292 bp |
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| Protein Length | 763 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637128057 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | NP_954403 |
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| Protein GI | 39998452 |
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| COG category | [K] Transcription
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains
[COG4624] Iron only hydrogenase large subunit, C-terminal domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGCCGA TAATTACCGA CAAGGAAAAG TGCCGCAAGT GCTACTGCTG CGTCAGGAGC
TGCCCGGTCA AGGCAATCAA GGTTGAAAAA CGCTACACCG AAATTATCTT TGACCGCTGC
ATCGGCTGCG GCAACTGTCT GAGCAATTGC CCCCAACGGG CAAAGATGGT GGCCGACAAA
GTGGGTGTTA CCGAGAGTCT TCTCACCTCG GAAGACAAGG TAATCGCCGT GCTCGGATCA
TCATTTCCAG CCTTTTTTCA CAATGTTGCA CCGGGCCAGC TTGTGGCCGG CCTCAAGCGG
ATCGGCTTCC GTGAAGTCCA CGAAGGGGCC TACGGTGCTG AACTGATCGC TGACGATTAC
GCCCGTATTA CCGGCGATAA TGACCGGACC TACATTTCAT CCCACTGCCC GGCCATCGTT
GACCTGATCG AGCGACACTA CCCGAAACTG CTCAGAAACC TGGTGCCCGT CGTTTCTCCC
ATGATCGCCA TGGGCCGCTA TCTCAAGGAA GTTCTGGGCC CCAAGACCAA GGTGGTCTAC
ATCAGCTCCT GCATTGCCGC AAAGTTCGAA ACCCAGATGA CCGAAACGCG GGGAGCCATC
GACATTGTTC TCACCTATCG GGAACTGGAG GGCATCTTCC GCAGCCGGCA GATTTCCCTC
CCGGCCCTCG ATGCGCTTCC CTTCGACGGG CTTGCGCCCA CGGTGGGACG ACTTTTCCCC
ATCAACGAGG GAACCTTCCG GTCGTTCTCC ATGTCGGCGG ACCCCCTTGA CACTGAAATA
GTCTCCGCCT GCGGCGAAGT AAACGTCATG GGCATCATCA GAGACTTGGC TGCAGGCAGG
ATCGCCCCCC GCTTTGCCGA TCTGCGCTTC TGCTATGACG GGTGCATCGG CGGTCCCGGC
CGCAATAGCG AACTGACCGA ATTCTACCGC CGCAACCTGA TCATTAACCA TTACAAGCAG
GACATCCCCT ACGAGACGGC TCCGCACTAT CTCTCCTCCC GTGAGCAGAC CGGCCTGGAC
CGCTCTTTTG CCAGCAAGCA CGCGCGCCTC GAGTCGCCAA AAACAAATGA TATCAAGAAA
ATACTGCAAG CCACCAGCAA GTACTCGGTC AAGGACGAAC TCAATTGCCG CGCCTGCGGC
TATCGCACCT GCCGCGAGTA TGCCGTGGCG GTCTACCAGG GCTTGGCCGA GATCGAGATG
TGCCTTCCCT ACAACCTCCA GCAACTGGAA GAGGATCGTG GTCGCCTGAT CCAGAAGTAC
GAGCTCGCCC GTCGAGAACT CGACCGCGAG TATACTGACG AGTTCATCGT CGGCAACGAC
CGCAAGACCT TGGAAGTACT TGATCTCATC AAGCAAGTGG GGCCGACGCC GACGACGGTT
CTGATCCGGG GCGAGTCGGG AACCGGCAAG GAACTCACCG CCCGAGCCAT TCATCGCTTC
AGCAAGCGCA ACGATAAGCC CCTGGTGACC GTGAACTGCA CCACTATCAC CGACTCCCTT
CTGGAGAGCG AACTCTTCGG ACACAAGCGG GGGGCCTTCA CCGGTGCCAT CGCCGAGAAA
AAGGGGCTGT TCGAGGCCGC CGACGGCGGC ACCATTTTCC TGGATGAAAT CGGCGATATC
ACGCCGAAAT TGCAGGCAGA GCTCCTGCGT GTCCTCGACA TGGGCGAGGT GCGTCCCGTT
GGGGGTACGA CCGCCCGCAA GGTCGACGTA CGCCTCATTG CCGCAACCAA CCGGAACCTC
GAAGAAGGAG TACGGGAGGG CTGGTTCCGC GAGGATCTGT ATTATCGCCT CAACGTTTTC
ACCATTACCA TGCCGCCTCT GCGCAACCGG GTGGAGTCGA TTCCGATCCT GGCGCACCAC
TTCATGGAAA AAGCCAGCAC CAAACTGAAC AAACGGCTCT CAGCCATCGA AGAGCGGGCC
GTCATCGCCC TCACCAAGTA CCCTTGGCCC GGCAATATCC GCGAGATGCA GAACGTCATC
GAACGGGCTG CGGTTCTTGC CCACGACGAT GTTATCCACC TGGAGAACCT CCCCCTGGCC
CTTTCGGAAA ATCTGGCAGG AAGCCCGACC GCCGACCTGG ATATCCGGGC TTCCTTCCGC
GCGGAGCGCG AAAGGCATGT GGTCAAGCTC GAGAAGAAGC TGATCCAGCG CTATCTGGCC
GAGGCAAACG GCAATGTGAG CCGTGCCGCG CGGCTCGCCA ACATTCCCCG CCGAACCTTT
TACCGCCTGC TCGACAAGTA TCGCCTCAAA GACAAAGAGG TGCGGGATAT GCCGCAGGGG
GACAGACAAT AG
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| Protein sequence | MEPIITDKEK CRKCYCCVRS CPVKAIKVEK RYTEIIFDRC IGCGNCLSNC PQRAKMVADK
VGVTESLLTS EDKVIAVLGS SFPAFFHNVA PGQLVAGLKR IGFREVHEGA YGAELIADDY
ARITGDNDRT YISSHCPAIV DLIERHYPKL LRNLVPVVSP MIAMGRYLKE VLGPKTKVVY
ISSCIAAKFE TQMTETRGAI DIVLTYRELE GIFRSRQISL PALDALPFDG LAPTVGRLFP
INEGTFRSFS MSADPLDTEI VSACGEVNVM GIIRDLAAGR IAPRFADLRF CYDGCIGGPG
RNSELTEFYR RNLIINHYKQ DIPYETAPHY LSSREQTGLD RSFASKHARL ESPKTNDIKK
ILQATSKYSV KDELNCRACG YRTCREYAVA VYQGLAEIEM CLPYNLQQLE EDRGRLIQKY
ELARRELDRE YTDEFIVGND RKTLEVLDLI KQVGPTPTTV LIRGESGTGK ELTARAIHRF
SKRNDKPLVT VNCTTITDSL LESELFGHKR GAFTGAIAEK KGLFEAADGG TIFLDEIGDI
TPKLQAELLR VLDMGEVRPV GGTTARKVDV RLIAATNRNL EEGVREGWFR EDLYYRLNVF
TITMPPLRNR VESIPILAHH FMEKASTKLN KRLSAIEERA VIALTKYPWP GNIREMQNVI
ERAAVLAHDD VIHLENLPLA LSENLAGSPT ADLDIRASFR AERERHVVKL EKKLIQRYLA
EANGNVSRAA RLANIPRRTF YRLLDKYRLK DKEVRDMPQG DRQ
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