| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU3350 |
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| Symbol | |
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| ID | 2686444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | + |
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| Start bp | 3681280 |
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| End bp | 3682977 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637128044 |
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| Product | sensor histidine kinase/GGDEF domain-containing protein |
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| Protein accession | NP_954390 |
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| Protein GI | 39998439 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGCGGA CCGAGGAACT GGAGCGCGTC AACGAGCGCC TCTTCCTCGC CGATCAGGTA
AAGACCGACT TTCTGTCCCA CATGTCGCGG GAGTTCCAGC GCCCTCTCAA CCATATTGTG
GATTTCGCCC AGTGTCTGCG GGAAGGGGCC ATGGGGCCGG TCACCCGCGA GCAGCGGATC
TGCCTCGACA CGATTATTGC CCGGGGCAAG AGGCTTCAGC GGCTGCTGGA AAGGGTCCTC
TCCCTCTGCA ACGACGAGCT GGGGATGGCC CTGTTCCTGC CCCGGAAGTT CCCGGTGCGC
GAAGTGCTGG ACCACGTCAT GGACAGCCTG CGGGGAGCGG CCGGAAAGCG GGGGGTGGAG
CTCCATGCCT GCTGCGGCGA AGACGGATGC ACCATCACTG CCGACAAGGG GAAATTCACC
TTCATCATCG AAGAGTTGCT GACCAATGCC CTCAAGTTCT CGGACCGGGG AGGACGGGTG
GACGTCGCCA TCGACCCCGT AAAACGGCGC GGGAGAGGCG AAGAGCTCCG GATCACGGTT
TCTGACCAAG GGAGAGGTAT CGGCAGCAAG GAGCTTGAGC AGATCTTCCG GAGCTTCGAG
ATGGGAAAAC GGGGGCAGGC AGAGCCGGGC AGCCTCGGCA TCGGGCTCAC CCTGGTCAAA
CGTTTCGTGG AGCTGCATGG CGGCACTATA GCCGTGGAGA GCACCCCCGG CATCGGGAGT
ACCTTCACGG TCGTGCTCCC CCGCCAAGGC CCCGCTGAAC GGGTCGGTCC ACCGCCCCGG
GTTATCCTGG CCGACCAGGA CCCTGAACGG CTCCGGGAGC TGGCCGATGC ATTACGACAG
GAGCGGTGTG ACATCATTAC CGCCGTGGAC GGGCGGGACG CCCTCGACAA GGGGATCGCA
CAGACACCGG CGCTCTGCAT CCTCGCCCTC GACTTGCCGG GAATCGACGG AATCGACGTC
TGCTCCCGTC TTAAGGCCCA TGAACAGAGC TCCCAGATTC CGGTGATCAT CACCGCGCCC
CACCGGGATG CATCAGTTCG GTCCCGGTGT GCCCAGGCGG GAGCCGACGG ATTTTTCGCT
CTCCCCGCCG AAATGGGCGA TCTCCTCATG GCGGCGCGGG GACTCATTGC CCGAAAACTC
AGCTACGACT TCCTGAAGCG CAACTATGAG ATTGCCGCCA GCGAGGCCTT CACCGATCCC
CTCACGGGGC TCTTCAACCT CCGACAGTTC TGGCTCAGCC TCGACCACGA ACTGAAGCGC
GCCCGCCGCT ACCGCCGCAA CTGCTCGCTG GCCATGATCG ACATCGATTG GTTCAAGCAG
TACAACGACT GCCACGGCCA CCTCCGGGGC GACGAGGTCC TCAGGGAGGC TGCCGCCGTG
TTCCGCGGCT GCATCAGGAC CTCGGACATC GCGGCACGCT ACGGGGGGGA GGAGTTCGTC
GTCATCATGC CCGAAACCAC CAGGGAGCTG GCTCTGCTGG CCGCCGAGAA GCTGCGCCGG
GCCGTGGAAG AGCATCTCTT CCCGCTCCGG GAGACCCAGC CCGGCGGCGC TCTCACGGTC
AGCATCGGCA TCGCCACCTT CCCCGACGAC GCCGAGGACG GGCGGGAACT GGTCGAGGCC
GCCGACCGGG CCCTCTACCG GGCAAAGGAA GGGGGGCGGA ACCGGGTGGT TGCCGCAGTG
GCGGACGGAA CCGATTGA
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| Protein sequence | MERTEELERV NERLFLADQV KTDFLSHMSR EFQRPLNHIV DFAQCLREGA MGPVTREQRI
CLDTIIARGK RLQRLLERVL SLCNDELGMA LFLPRKFPVR EVLDHVMDSL RGAAGKRGVE
LHACCGEDGC TITADKGKFT FIIEELLTNA LKFSDRGGRV DVAIDPVKRR GRGEELRITV
SDQGRGIGSK ELEQIFRSFE MGKRGQAEPG SLGIGLTLVK RFVELHGGTI AVESTPGIGS
TFTVVLPRQG PAERVGPPPR VILADQDPER LRELADALRQ ERCDIITAVD GRDALDKGIA
QTPALCILAL DLPGIDGIDV CSRLKAHEQS SQIPVIITAP HRDASVRSRC AQAGADGFFA
LPAEMGDLLM AARGLIARKL SYDFLKRNYE IAASEAFTDP LTGLFNLRQF WLSLDHELKR
ARRYRRNCSL AMIDIDWFKQ YNDCHGHLRG DEVLREAAAV FRGCIRTSDI AARYGGEEFV
VIMPETTREL ALLAAEKLRR AVEEHLFPLR ETQPGGALTV SIGIATFPDD AEDGRELVEA
ADRALYRAKE GGRNRVVAAV ADGTD
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