Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU3279 |
Symbol | uvrC |
ID | 2688274 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 3598194 |
End bp | 3600035 |
Gene Length | 1842 bp |
Protein Length | 613 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637127971 |
Product | excinuclease ABC subunit C |
Protein accession | NP_954319 |
Protein GI | 39998368 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCGACA CCAAGCGACT GACAACCCTC CCCGATGCAC CGGGTGTCTA CCTCATGAAG GGGAACGGCG GGGACATTCT TTACGTGGGA AAGGCCAAGA GCCTCCGTAA ACGGGTCCGC TCCTATTTCA GCAAGGGGGG AGAGTCACGC TACCATATCC GGTTCCTGGT GGGCCGGGTC GCCGACATCG ACGTAATCGT CACCGACACA GAGAAGGAAG CCCTCCTCCT CGAGAACACC CTTATCAAGG AACATCGCCC CCGGTACAAT CTGGACCTGC GGGACGACAA AACCTACTTT TCCCTCCGAC TCGACATGAA CGAGGAGTTT CCCCGCCTGA CCATCGTGAG ACGGCCGGGC AGGGACGGAG CCCGCTACTT CGGCCCCTAT TCCTCTGCTT CTGCCGCGCG GGAGGTCCTC AAGCAGCTGT ACAAGCTCTT CCCGCTCCGC CACTACCCGC TGGAGAGCTG CCGCCGTCGC AGACGCCCCT GCCTCTTTTA CCAGCTCAGG CAGTGCGCCG CCCCCTGTCA CGGGCTCATC TCGGGCGAAG ATTACCAATC ACTGGCAGAA GGCGCGGCCT TGTTCCTTGC AGGAAAAAAC AGCGACCTAA CCCGCCTCTA CAGGCAGCGC ATGGCCGCAG CAGCAGCGGA TGAACGGTAT GAGGACGCCG CCCGCTACAG GGACTTGATC CGCGCCATTG AGGTCACCGT AGAGAAGCAG AAGATGGTAG CCGGCGACGG CGACACGGAC GTAGTCGGAT TCTTTCGCGA CGCCACAGAC CTTTCCGTCT CGATCCTCTT CTACCGCGGC GGCCGCCTCA TGGGGAGCCG CAACTACCTC CTGGACTGGG AAATGGATGA CGCCGAAGGG CTCTCGTCGT TCCTGTCCGG CTACTACAAC AGGGATGTCG TCATCCCCGA TGAAATCCTC ATCCCCTTCA CCGTGGACGA CACGGACCCC CTCGGCGAAC TGCTAACGGA ACGGCGAGGG AAAAAGACCG TTCTCCGCCA CCCCGTGCGA GGGACCAAGG CAGAACTGGT CAGGCTGGCG GCGAGAAACG CCGAGGCGTA CCTGCATGAA AAGCGGGAAA AGGACTCCGG CATGGAGCAG GTCCTCGGAG AGCTCAAGGA GAAGCTCCAC CTGACCAATC TCCCCCGACG AATCGAATGC TACGACATCT CCACCATCCA GGGACGCTAT TCCGTGGGAA GCAGGGTCCG GTTTCAAAAT GGCGCTCCGG ACAAGGCGGG GTACCGCCGC TACCGGATAC GGACCGTTCC CGGCACCGAC GACTTCGCCA TGATGCACGA AGTTCTGTCC CGGCGCTTCA GGGACGGACA CGGCGGGGAC GGTCGGCCGG ACCTCATTGT GATTGACGGG GGAATGGGGC AGTTGAATGT GCTGACCGCA ATCCTGGAGG AGCTGGGGCT TCACGGCATT GACGCCGTCT CCTTGGCAAA AAGCAGGGTA GAGCGAAATA TGTCCGATAA TGAGGTGGTC CGGAGCGACG AACGGGTCTT TCTCCCCGGC CGCCGCAACC CGGTGGTGCT CCGGCAGAAC GGTGCACCGC TTCTGCTCCT GGCACGAATC CGGGACGAAG CTCATCGCTT TGCCATAACC TATCACCAGA AGCTGCGCGG TAAAGGATCG ATCCGATCGA GCCTGGAAGG CATTCCCGGC ATCGGTGAAA AGCGCAAGCG TGAACTGCTG AAACGTTTCG GCAGCATCAG GGCACTGCGC CAGGCGGACC GAGAACAGCT TGCCGCCGTC CCCTCCGTCT CCCCCGCCTT GGCGGATGCC ATCTGGAAGG CCCTTCACGG CGAAGAGCCC GAGGCGCCAT GA
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Protein sequence | MFDTKRLTTL PDAPGVYLMK GNGGDILYVG KAKSLRKRVR SYFSKGGESR YHIRFLVGRV ADIDVIVTDT EKEALLLENT LIKEHRPRYN LDLRDDKTYF SLRLDMNEEF PRLTIVRRPG RDGARYFGPY SSASAAREVL KQLYKLFPLR HYPLESCRRR RRPCLFYQLR QCAAPCHGLI SGEDYQSLAE GAALFLAGKN SDLTRLYRQR MAAAAADERY EDAARYRDLI RAIEVTVEKQ KMVAGDGDTD VVGFFRDATD LSVSILFYRG GRLMGSRNYL LDWEMDDAEG LSSFLSGYYN RDVVIPDEIL IPFTVDDTDP LGELLTERRG KKTVLRHPVR GTKAELVRLA ARNAEAYLHE KREKDSGMEQ VLGELKEKLH LTNLPRRIEC YDISTIQGRY SVGSRVRFQN GAPDKAGYRR YRIRTVPGTD DFAMMHEVLS RRFRDGHGGD GRPDLIVIDG GMGQLNVLTA ILEELGLHGI DAVSLAKSRV ERNMSDNEVV RSDERVFLPG RRNPVVLRQN GAPLLLLARI RDEAHRFAIT YHQKLRGKGS IRSSLEGIPG IGEKRKRELL KRFGSIRALR QADREQLAAV PSVSPALADA IWKALHGEEP EAP
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