| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU3191 |
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| Symbol | |
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| ID | 2688377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | - |
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| Start bp | 3496790 |
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| End bp | 3498706 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637127884 |
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| Product | TPR domain-containing protein |
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| Protein accession | NP_954232 |
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| Protein GI | 39998281 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAAAAT ACCTTACACT CTTCGTGCTT TCCCTGTCGG CCGCGACCGC GCTGGGGGGG
GAGGCAGTTG CCGCCCAGGA GCGGTGCTGG GAGGCGAAGA GGCTTGTCAA ATCACTTTCG
GGCGAGGATG AGGACGCCCG GGCGAATACT GAAAAACGAA TCCTCGAATA TTGCTCCGAC
GGCGCTGCCG GCCATTTCGT CAAGGGGCTC CGGGCCGAGC GTGAAAAACG CTTCGACCAG
GCGGTGACGG AATATCGCGA AACGCTCCGG ATGGACCCTT CGTTTCCCGA TGCCCAAGGA
AGTCTCGGCC TGGCCCTGCT GGCCAAGGGT TCCGCCGACG AGGCCGTGGT GGAACTGACC
CGCGCCCTGG CCGAAGATTC CAAGCCCCGC TATCATCAGG GCCTCGGCAA AATTTTTGCT
GAACGCTCCC TCTATTCCCT AGCCCTTTAT CATTATGCCG AAGCCCTGCG CGAACTCCCC
GACGACCCGT CGATTCGTGT GGACCTCGCA CAGGTCTACC GGCAGGCAGG CAAAAAGGAA
GAGGCGGAGA AGGAGCTGAA AAAGGCCCTC ACCGTTGCTC CGGCCAATGA AAATGCCCGC
CTTGCCCTCG CATCTCTCTA TCTGGCCGAT GGCCGCACCG AAGGCGCGGT CCAGGAACTC
AAGCAGGCCC AACTGGCCAA TCCCGGCAAC CGCGGCATCC ACCTCCTCCT TGCAGAAGCA
TATGAAAAAC TTGGTGATCG CAAGGCCGCC GAGTACGAAT ACACCCTTTC CGGGCGCCAA
CGAGGCGTCC TTCCCGAAGA ATACCTCCGT CGGGGTGACG AACGGATGGC AGCCAAAGAG
TTCCCCAAGG CCGTGGAGGA GTACCGTGCT GCCCTGAAAG AGCGTCCCGG GTCCGCGGAG
GTGCTGCATA AGCTGTCCGG TGCCCAGGCA GCCGCGGGGC TCGATGACGA TGCCATTGCA
TCCTACCGCG AACTGCTGCG AGTAAAGCCC GGCAATGCCG CTAATCATTA CAACCTCGGC
ATTATCTACG AGCGCAAGGG GCTCATCGAC GAGGCCGTGG TGGAATACAA ACAGGCGGTT
CGACTCTCTG CCGAGCACGG TGACGCCCGG CGCCGACTCG CCGATATCTA CACCCTGCGC
GGCAGCCATC CCCAAGCCAT TGAGCAGTAC CGCGAACTCC TCAAGCGGGG CGACAGCAAT
CCCGTCCTCC ATCTCAAGCT TGCCCGCGGT TTCATGTCCT CGAAGAACAC CAAGGATGCC
ATAGCCTCTT ACAACGAGGC CCTCAAACTG GACCCGGACA ACCTGGAAGC CCATCGGGAA
CTCGCTGCCG TCTACCGCAA GTTGAACCAG ATGGACGACG CGTCCAAGCA GTATCGCGAG
GTGCTCCGCA TCAAAAAAGA CGATGCCGAG GCCCGCAACA TCCTGACAGC TATTTACGTC
AAGGAGAAGA AATACGATGA ACTGGTCCCC CTTCTCCAGG AAGGGGTCGA ATTGGCTCCC
AACGATGCCA TGAGCCACTA CAAGCTCGGG CTCATTCATG AATTCCGCAA GGACTACGAT
TCAGCCGAGG TGAGCTACCG GAAAGCGACC GAACTCAAGG ATGATCACGC AAAGGCTCTC
AACGCCCTGG GGCGCATCTA TCTGAAAACC GGCAAACTTA CCGAGGCCAA GGAGGCCCTG
GAAGCGGCCA AAAAGGCCGA CCCTGGCATG GAAGAGACGG CTGTTCTTCT CAGCAACATC
AAGGATGAGC TGAGCCCGGA GCCGAAGCGG TACGTGAAGA AGAAAGGGAC CAAAGGGCGC
AAGTCCGCCG TTTCCAAGAA GAGGTCCGGC AAGAAAAGCT CCGCCAAGAA GAGTACAACG
AAAAAGAAAT CGACGAAAAA GAGTTCGTCG TCCGGAAAGA AAAAAAGCGG CACATAA
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| Protein sequence | MKKYLTLFVL SLSAATALGG EAVAAQERCW EAKRLVKSLS GEDEDARANT EKRILEYCSD
GAAGHFVKGL RAEREKRFDQ AVTEYRETLR MDPSFPDAQG SLGLALLAKG SADEAVVELT
RALAEDSKPR YHQGLGKIFA ERSLYSLALY HYAEALRELP DDPSIRVDLA QVYRQAGKKE
EAEKELKKAL TVAPANENAR LALASLYLAD GRTEGAVQEL KQAQLANPGN RGIHLLLAEA
YEKLGDRKAA EYEYTLSGRQ RGVLPEEYLR RGDERMAAKE FPKAVEEYRA ALKERPGSAE
VLHKLSGAQA AAGLDDDAIA SYRELLRVKP GNAANHYNLG IIYERKGLID EAVVEYKQAV
RLSAEHGDAR RRLADIYTLR GSHPQAIEQY RELLKRGDSN PVLHLKLARG FMSSKNTKDA
IASYNEALKL DPDNLEAHRE LAAVYRKLNQ MDDASKQYRE VLRIKKDDAE ARNILTAIYV
KEKKYDELVP LLQEGVELAP NDAMSHYKLG LIHEFRKDYD SAEVSYRKAT ELKDDHAKAL
NALGRIYLKT GKLTEAKEAL EAAKKADPGM EETAVLLSNI KDELSPEPKR YVKKKGTKGR
KSAVSKKRSG KKSSAKKSTT KKKSTKKSSS SGKKKSGT
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