Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU3025 |
Symbol | |
ID | 2688519 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 3329371 |
End bp | 3330924 |
Gene Length | 1554 bp |
Protein Length | 517 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637127718 |
Product | heptosyltransferase family protein |
Protein accession | NP_954067 |
Protein GI | 39998116 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAGAGA TCGCCCTTCT CGCCATAGCC CGATACGGGG ACCTGATCCA GACGACGCCG CTGGTGCGGG CGTTGCGCCG CGCCCACCCC GGCGCCCGGA TCACCGCCAT CGTGGAGGAC CGCTTTTGCG GCATCCTGCC GCTGCTCCCC GGCATCGACC GAACCATCGT CCTCAACAAG CAGGACATCG CCTGGGACAT CGCCACCGGC GATTCTCCCC TGGTGCCCTA CCTCAAGATG GATGAGTTCG TCCGGAAGCT GGAGGAGGGG AGCTACGACC TGCTGGTCAA CATCACCTGT TCGCGCCTCT CCGCCTTTTT CGCCTCCTGC GTCACGAGCC GCCGCCGCAC CGGCATCTCG GCCGACGAGG CCGGGGAGCG GAACATCGTG ACCCTCTGGG GGCAGTACAT CTTCAGCTGG TTCAACGACA ACATCCGCAA GTATAACGCC ATCAACCTGG TGGATATCTT CACCCGGCTG GGCGAGGTCC CTCCAGACGG GCGCCGGGTA GAACTGGTCG CCACGGAGAA GGGGGAGCGA TTCGCCGACG ACTTCCTGGA CCGCCATGGG CTCAGGGGGC AGCGCCTCGT GGGACTGCAG CTGGGGGCCA GCGAGGCGAC CCGGATCTGG CCTGCCGAGC ACTTCGCCCG CATCTCGGAT CGGCTCCAGC GGGAACTGGG GGTACGGACC ATCCTCTTCG GGGCTCCCGT GGAAAAGCAC CTGGCCGGGC AGGCTATGGC CGCCATGGAA ATGCCGGCCG TGGACGCGGT GGGCGAAACC GGGATCGAAG AACTCTACTC CCTGGTGGGG CGCTGCGCGG CCCTGGTATC CAACGACACC GGCACCATGC ACTTCGCCGC CGCGGCCGGC GTGCCCGCGG TCATGCTCTG CATTGGCCCG GCTTTTTTCC GCTGCACCGG CCCCTATGGC GAAGGGCACC TGGCGCTCCA GCCCGACCTG CCCTGCTCGC CCTGCCCCTA CAGCCTGGTC TGCGCCGATC CGGTCTGCCG CGACACCATT TCTCCCGAGG CGGTCTTCTC GGCTTGCCGC ATGATCCTGG CCGGCGCTGA TGGGTTGGGG AATGCCGATT TTTCCGGCGT GAGGGTCTAT CGGAGTTCAT TTGCTCCCGA CGGATACCTG ACATGGGATG GCCTGTTCAA TGTGGACGCC TGGGAAGAAG AGCAGGTCAA GCGGCGCGAA TCCGCCTGGA AGGGATGTTT CGACGGAAGC ACGAAGGGGT GCGGTGCTCC CGGCGACGAG ACCTTGCGGG CCTTCTGGGA GCTCACGGGG CGGGGGATTG AAGCAACAGA GGCCATCATC CGGGCGGCTC GGAAAAAGCC CCTGCCCGTG GACGAGATCC GGCGCCTCGG CGAGAAGGAG TCGGCCATCG AGGCGGAGGT GAAGCTCATG GGCTATCGTC ACGAACCTCT GGCCCCGGTC ACCGAATTCC TGACGCTCAT GCGTGAAAAC ATCACCGGCG AGGAGCTGGG GCGGATCGCG CGGGAGACGC GTTCCCTTTA CGAGACCGGG CGCTGCCTGG CGGCACTGCT GTAG
|
Protein sequence | MKEIALLAIA RYGDLIQTTP LVRALRRAHP GARITAIVED RFCGILPLLP GIDRTIVLNK QDIAWDIATG DSPLVPYLKM DEFVRKLEEG SYDLLVNITC SRLSAFFASC VTSRRRTGIS ADEAGERNIV TLWGQYIFSW FNDNIRKYNA INLVDIFTRL GEVPPDGRRV ELVATEKGER FADDFLDRHG LRGQRLVGLQ LGASEATRIW PAEHFARISD RLQRELGVRT ILFGAPVEKH LAGQAMAAME MPAVDAVGET GIEELYSLVG RCAALVSNDT GTMHFAAAAG VPAVMLCIGP AFFRCTGPYG EGHLALQPDL PCSPCPYSLV CADPVCRDTI SPEAVFSACR MILAGADGLG NADFSGVRVY RSSFAPDGYL TWDGLFNVDA WEEEQVKRRE SAWKGCFDGS TKGCGAPGDE TLRAFWELTG RGIEATEAII RAARKKPLPV DEIRRLGEKE SAIEAEVKLM GYRHEPLAPV TEFLTLMREN ITGEELGRIA RETRSLYETG RCLAALL
|
| |