Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU2888 |
Symbol | |
ID | 2688630 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 3173653 |
End bp | 3175164 |
Gene Length | 1512 bp |
Protein Length | 503 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637127581 |
Product | B12 binding /radical SAM domain-containing protein |
Protein accession | NP_953930 |
Protein GI | 39997979 |
COG category | [C] Energy production and conversion |
COG ID | [COG1032] Fe-S oxidoreductase |
TIGRFAM ID | [TIGR02026] magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00308859 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA TAAAGCGTGT GGCGCTCATC ACGCCCCCCT ATCACTCGGG GGTCGTGGAA TCAGCCGGCA CCTGGCTTAA TGTCGGATTT GTCTACATCG CCGGGTCTCT CAGGGCAGCG GGGTATGAGG TCGATTACTA TGATGCCATG TCCCTGTGGC ACACGTGGCC CGACATCAGG AGGCGGATCG AGGCGTTCCG CCCCGACGTG GTGGCCACCA CCGCCTTCAC CGCGTCCATC GTCGACGCGA TCAGGCTGCT GCGCTTCGCC AAGGAGATCG ATCCCGGCAT CGTGACCGTG CTCGGCAATG TGCACGCCAC CTTCTGCTAC GACGAGATCC TCGCCCATGA CCACGACGCC GTCGACTTCA TCGTCCGGGG CGAGGGTGAA GTAACGCTGC CCCGGCTCTG TACCTGCCTC AATGCCGGAG ACGATCCGTA CAAGGTGGAA GGGCTCGCCT TCCGGCGGGA CGGCGGCGTG GTGGTAACGC CGCGGGCGCC GTACATTCAC GACCTTGACG GGCTCCCCAT GGCCTGGGAT CTGGTGGAAT GGCCCATTTA CACCTACCGG GCAAAGAACG ACGCCCGGCT CGCCATCGTC TCCTCGTCCC GGGGGTGCAA GCAGCAGTGC TCCTTTTGTT CCCAGCAGCT CTTCTGGTCA CAGTCGTGGC GGGCCCGCTC CGCCGAGAAC TTCGTGGCGG AGCTTGAGAT GCTCCACACC GTGCACGGCG TCCAGGTGGC CATGCTTTCG GACGAGATTC CCACCTTTGA CCGGCAGCGA TGGGTCCGCA TCCTGGACCT GATGATCGAG CGGCAGGTTC CGGTCAAGCT CCTCATGGAA ACGAGGGTGG ACGACATCCT GCGTGATGCG GACATTATGG ACAGGTACCG GGAAGGGGGC GTCGAGCATA TCTACGTGGG GGTGGAGGCC GGCACCCAGG AGACCCTGGA CCTTTTCAAG AAGGACACCC AGGTGGAGCA GTCCAAGCAG GCTATCGACC TGATCAACAA CGCCGACATC GTCTCGGAAA CCTCCTTCGT GCTCGGCATG CCCGACGATA CGCCGGAATC CATTGCCCAG ACCATTGAGC TGGCCAAGCA CTACAATCCT GACATGGCCT TTTTCCTGGC CATAGCGCCC TGGCCCTACG CCGAGCTCTA TCCCCAACTG GAGGAGTACG TGGCCACCAA GGACTACCGC AAGTACAACC TGGTGGAGCC GGTCATCAAG CCGAAGCACA TGACCCTGGA AGAGCTGGAG CGCCAACTCG GCAAGGCGTC CCAGCAGTTT TTCATGCACA AATTCCAGAA TCTGCACCAG CTATCGGCAT GGAAGCAGGA ATTCATGCTC TCGGTACTGG ATCTCCTCAT CAATCATTCC TACCTGGCCG GCCAGATGCG GGCCATGCTC AAGGAGGGAA AGGAGATGCC GGCCGAGGTA AAGGCGCTGC TGCGCGCGGT CGGCGAGCGC ACGGGCGCAG CCCATCCCCA CGCGGTGGCG CCGATCCCCT GA
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Protein sequence | MKKIKRVALI TPPYHSGVVE SAGTWLNVGF VYIAGSLRAA GYEVDYYDAM SLWHTWPDIR RRIEAFRPDV VATTAFTASI VDAIRLLRFA KEIDPGIVTV LGNVHATFCY DEILAHDHDA VDFIVRGEGE VTLPRLCTCL NAGDDPYKVE GLAFRRDGGV VVTPRAPYIH DLDGLPMAWD LVEWPIYTYR AKNDARLAIV SSSRGCKQQC SFCSQQLFWS QSWRARSAEN FVAELEMLHT VHGVQVAMLS DEIPTFDRQR WVRILDLMIE RQVPVKLLME TRVDDILRDA DIMDRYREGG VEHIYVGVEA GTQETLDLFK KDTQVEQSKQ AIDLINNADI VSETSFVLGM PDDTPESIAQ TIELAKHYNP DMAFFLAIAP WPYAELYPQL EEYVATKDYR KYNLVEPVIK PKHMTLEELE RQLGKASQQF FMHKFQNLHQ LSAWKQEFML SVLDLLINHS YLAGQMRAML KEGKEMPAEV KALLRAVGER TGAAHPHAVA PIP
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