Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU2878 |
Symbol | |
ID | 2688664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 3153358 |
End bp | 3154461 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637127571 |
Product | aspartate-semialdehyde dehydrogenase |
Protein accession | NP_953920 |
Protein GI | 39997969 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0136] Aspartate-semialdehyde dehydrogenase |
TIGRFAM ID | [TIGR01745] aspartate-semialdehyde dehydrogenase, gamma-proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0701839 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGTCG GAATCGTCGG TTGGCGCGGT ATGGTCGGTT CGGTCCTCCT CCAGCGGATG GTGGAGGAAG GTGATTTTGG CATCGGCATC GAGCCGGTCT TCTTCTCCAC CTCCCAGGCG GGCCAGCCCG CCCCCATGAA CGCGGGAACG CTCAAGAGCG CCGATGACAT CGCAGAGCTG AAGAAGCTCG ACATCATCAT CACCTGCCAG GGGGGCGACT ACACCAAGGC GGTTCATCCT GAACTCCGCA AGCAGGGATG GCAGGGTTAC TGGATCGATG CGGCCTCAAC CCTCCGGATG GAGCCCGATG CGGTCATCAT CCTCGACCCG ATCAACCGCA ACGTCATCGA CGCGGCCCTG GCCAAGGGGC AGAAGGACTT CATCGGCGGC AACTGCACCG TCAGCCTCAT GCTCATGGGA CTGGGCGGTC TGTTCCGCGC CGGTCTGGTG GAGTGGATGT CGTCCATGAC CTATCAGGCC GCTTCCGGCG CCGGCGCTCC CAATATGCGC GAGCTCCTCT CCCAGATGGG TGTGCTACAG GGAGTAGTTG CCGAGGAGCT GAAGAATCCG GGGTCGGCGA TCCTGGAGAT CGACAAGAAG GTGACCGCTA CCCTGCGCGA CGGGTCCATG CCGATGAAGG AATTCGGCGG CTTCCCGTTG GCCGGCAACG TGCTCCCCTG GATCGACCGC GAGGTTGAGG ACGGCCAGAG CCGCGAAGAG TGGAAAGGGT TTGCCGAGAC CAACAAGATC CTCGGTACCT CCACCCCGAT CCCGGTCGAT GGCATCTGCG TCCGCGTCGG CGCCATGCGC TGCCACAGTC AGGCGATCAC CATCAAGCTG AACAAGGACC TGCCGCTGGC CGACATCGAG CAGATCATCG CCAACGACAA TGCGTGGGCA AAGCTGGTCC CCAACACCAA GGCCGATACC CTTGCCCAGC TCACGCCGGC AGCGGTTTCC GGGCTCCTCA CGGTTCCCGT GGGCCGCGTG CGTAAGATGA AGATGGGGCC CCAGTTCGTG CAGGCCTTCA CCTGCGGCGA CCAGCTCCTC TGGGGTGCCG CAGAGCCCCT GCGCCGGATG CTCCGCATCC TGGTGGAAAA GTAG
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Protein sequence | MKVGIVGWRG MVGSVLLQRM VEEGDFGIGI EPVFFSTSQA GQPAPMNAGT LKSADDIAEL KKLDIIITCQ GGDYTKAVHP ELRKQGWQGY WIDAASTLRM EPDAVIILDP INRNVIDAAL AKGQKDFIGG NCTVSLMLMG LGGLFRAGLV EWMSSMTYQA ASGAGAPNMR ELLSQMGVLQ GVVAEELKNP GSAILEIDKK VTATLRDGSM PMKEFGGFPL AGNVLPWIDR EVEDGQSREE WKGFAETNKI LGTSTPIPVD GICVRVGAMR CHSQAITIKL NKDLPLADIE QIIANDNAWA KLVPNTKADT LAQLTPAAVS GLLTVPVGRV RKMKMGPQFV QAFTCGDQLL WGAAEPLRRM LRILVEK
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