Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU2731 |
Symbol | ferA |
ID | 2685796 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 3007851 |
End bp | 3010157 |
Gene Length | 2307 bp |
Protein Length | 768 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637127422 |
Product | polyheme membrane-associated cytochrome c |
Protein accession | NP_953776 |
Protein GI | 39997825 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.209433 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTAGAA AAGTAACAAA GTATTCTGCT GTGCTTGCGG TTTCGTTGTT CGCGGCGGCG CTTGCCGGCT GCGGCTCCGA AAACAAGGAG GGGACGGTCG GAACCGGCCC TGGCGGCGTG GCAACCGTGG GCGATACCGC TTGCGTCCAG TGTCACAGCG CTGTCGTGGA TCCGCTGACC GGCGAGTCCA TCATCACGCA GTACACCCGC TCATTCCACT ACAGCAAGGG TGTCGGCTGC GAAGGCTGCC ACGGCGGCGG CGCCCAGCAC AATGGCGTCG GTCCCCTGCC GTTCCCGCTG GCCGGCCAGA GTGAGGCCCA GATAGCCGCC CGGTGCGCCT CCTGCCACAA TGGTGTGATT GCTCCCCTGA GCAGCTCGCC CAATTTCGTC AACGGCAACC ATGCCAACCC CTTTGGCGGG GAAGAGGCCA AGGAAAACCT CTGCAGCCGC TGTCACTCCC ACGAAGGAGC CATTTTCGGG GCACAGGCGG GCTTCACCGG CGACGGGAAC ATCCTGAGAA ACGCCGCCTA CCAGCCGGTG TATCCCCAGG ACCCCGAGAC CTTCAACGTC ATGACGTGCG CCACCTGCCA TCAGCACGGC GGGGCTCAGC GTCAGGTCTT CACCCAGATC TCGACGGCCG GCGTGCCGAA TAGCCGGCGG ACGGTGGCCT GGGATCCGAA CCGCAACAGC ATCAATGATC AGTACGACCT CTGCACCAGC TGCCACACCG TCAACACCAT GACCGGCACC CTGATCGGCA GCGGCAACGT TCTCCAGATC TTCACCAGCA ACGCCGTCGG CTCCGGCACC AAGAGCGTGA CCACGGCCCC CTTCTACCAC AACACCCGTT GGTTCCGGAC CCTGCCTTCG ACCCACTACG ACTTCCCGGA ATCCAAGACC ACGGCCAGCG GCACCACGAT CGAAGGGTAT GTAATCCGGC GCAATACCGC CAACCCCTGC TTCGACTGCC ACGGTCACGA GTTCCAGACC AACACCCGGC GGCTGGCCGG AGCGGACCGG CCTAACACTA TTTTCCTCGA CTGGGGACAG TCGGCCCATG GTGGCAAGCT CCTCCAGGCC AAGGTGGCCG CAGCGGCCCT GGCGAGCTCC GGCGCGGCTG AAGTGGACGA TGTCATGAAG GCCGGCGCCA CCGACGCCAC GGCTCCCGGC TGGACCCACT ACAACTGGGA CGATACTGCC AGCCGCGGCG CCTGCCAGCG CTGCCACACT TCGACCGGCG CCTCGAACTT CCTCAACAAC CCCGCCGGAT ATGACAGGAC CGGCGCAGGC AACAGCTTCA CTCATTTGGC CGGCTGGACC AGCAGCAACA AGCGGTCCGA CCAGAACGAA CTGCTCTACT GCTGGGGCTG CCACACCAAG GCCGGCACCG GTGAGCTGCG CAACCCCGGG GCCATCACCG AGGTTTATCC TGGGATCAAC TCAACGAGCA CTGGAACTAC CGGTTTGGAC GTTACGGTTT CCTATCCTGA TATCAAAGGG TCTAACGTGT GCATGGGGTG TCACCTCGGG CGTGAAGTTG GCGACAACAT CAAGGCAATC ACCGACGCGG ATGGTATCCT TGGCTTCGTG AACTCCCACT ATCTCACCGC AGGCGGCCAG CTGTTCGGCA CCACCGGTTA TGAGTACGCA ACCCGCAGCT ACGCCAATCC GGCCTTCTTC CAGCATGACA AGATCGGCAC CGCCGCTGCC CCCGGCACCG GCACCAACGG CCCCTGCGCC GGCTGCCACA TGACCACCCC GACCTCGCAC CTGTTCCTGC CGGTGACCAA GGACGGCACG GGCGCCATCA CTGCCATTAC CAGCACTGCC TGCGTCACCT GCCATGCCGG TACCTTTGCG CTCACCCCCG AGGGACTGAC CGCCGAAGAA GAAGAGTACG TGGCATCCCT TGAAGCCCTC AAAGCGGCTC TGGCCGGCAA GGGAATCCTC TTCTTCAACG CCCATCCGTA TTTCTACAGA GATACGAATG CCAACGGCAT TGCCGATCCT GGGGAGACTG TTTCCTCGAA CGCCTTCACC AACTGGGCTG GCGTGTACGG GCTTGCCCTC TGGCAAGATG TCATGGGCGC TGCATTCAAC GCCAACCTGC TGATCCACGA TCCGGGCGGC TATGCCCACA ACCGCTTCTA CAGCAAGCGT TTGATCTGGG ATTCCATCGA CTTCATCTTT GACGGCGTAC TGAACAACGA CGTCACGGCT GCGATCGATG CCCAGGTAAC GGCGGCTCGA CTGGACAGCG CCACGGCAAC GGCCGCCAAG GCCTACCTCG GGGCGACCCG TCCGTAA
|
Protein sequence | MSRKVTKYSA VLAVSLFAAA LAGCGSENKE GTVGTGPGGV ATVGDTACVQ CHSAVVDPLT GESIITQYTR SFHYSKGVGC EGCHGGGAQH NGVGPLPFPL AGQSEAQIAA RCASCHNGVI APLSSSPNFV NGNHANPFGG EEAKENLCSR CHSHEGAIFG AQAGFTGDGN ILRNAAYQPV YPQDPETFNV MTCATCHQHG GAQRQVFTQI STAGVPNSRR TVAWDPNRNS INDQYDLCTS CHTVNTMTGT LIGSGNVLQI FTSNAVGSGT KSVTTAPFYH NTRWFRTLPS THYDFPESKT TASGTTIEGY VIRRNTANPC FDCHGHEFQT NTRRLAGADR PNTIFLDWGQ SAHGGKLLQA KVAAAALASS GAAEVDDVMK AGATDATAPG WTHYNWDDTA SRGACQRCHT STGASNFLNN PAGYDRTGAG NSFTHLAGWT SSNKRSDQNE LLYCWGCHTK AGTGELRNPG AITEVYPGIN STSTGTTGLD VTVSYPDIKG SNVCMGCHLG REVGDNIKAI TDADGILGFV NSHYLTAGGQ LFGTTGYEYA TRSYANPAFF QHDKIGTAAA PGTGTNGPCA GCHMTTPTSH LFLPVTKDGT GAITAITSTA CVTCHAGTFA LTPEGLTAEE EEYVASLEAL KAALAGKGIL FFNAHPYFYR DTNANGIADP GETVSSNAFT NWAGVYGLAL WQDVMGAAFN ANLLIHDPGG YAHNRFYSKR LIWDSIDFIF DGVLNNDVTA AIDAQVTAAR LDSATATAAK AYLGATRP
|
| |