Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU2696 |
Symbol | |
ID | 2687530 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 2973838 |
End bp | 2976996 |
Gene Length | 3159 bp |
Protein Length | 1052 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637127386 |
Product | AcrB/AcrD/AcrF family protein |
Protein accession | NP_953741 |
Protein GI | 39997790 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCCGCT TTTTCATAAA CAGACCAATT TTTGCCTGGG TCATCTCCAT CATGGTCATG CTGGGGGGGC TTTTGGCCAT CAAGACCCTG CCGGTCTCCC AGTATCCGCC CATCGCGCCG CCCCAGATCA CCATCAACGC CATGTATCCG GGGGCTTCGG CCCAGACGGT GCAGGATACG GTTACCCAGG TCATCGAGCA GAAGCTGAAC GGCATCGACA ACCTGATCTA CATGTCGTCC ACCAGCGACT CGGCCGGGGC CGTGGCCATC AACCTGACCT TCAAGGCCGG CACCGATCCC AATATCGCCC AGGTTCAGGT GCAGAACAAG CTGCAGCTGG CCACGCCGCT CCTCCCCCAG ATCGTTCAAC GGCAGGGGAT CCAGGTGGTT AAGTCCACCA AGAACTTCCT GATGATCGTC GGTCTGGTCT CGGAAGACGG TTCGTTGACG CGCGATACCC TGACCGACTA CCTGGTCTCC AACGTTCAGG ATATCATCAG CCGCACCGAA GGGGTGGGCG AGGTAACGGT CTTCGGTTCC CAGAACGCTA TGCGGATCTG GCTGGATCCT GCAAAGCTGA ACAATTTTCA TCTGACCACC AATGATGTAA TTGCAGCGAT TCAGGCGCAG AACGCTCAGG TTTCGGCCGG CCAGTTCGGC GGCAGCCCTG CCGTCCACGG GCAGCAGCTG AATGCAACTA TCACCGCCCG CACCCTGCTC CAGACGCCGG AGCAGTTTAA CAACATCATC CTGCGCACGA ACCCCGACGG CTCCACGGTC AAGCTGAAAG ACGTAGCCGA GGCCAAGGTC GGTACTGAGA ATTACGATAT CGAAGCACGC TACAAGGGAA AACCGCTGGG CGGCATGGCG ATCAGGCTGG CGGCCGGCGC CAACGCGCTG GATACGGGTG AGCGTGTCAA AGCCAAGATG GAGGAGCTCT CCCGCTACTT CCCCGCCGGC ATGAAGGTTG TCTACCCCTA CGACACCACC CCCTTTGTGA AGATCTCCAT CAAAGAGGTG GTCAAGACCC TGGTCGAGGC CGTCTTCCTG GTCTTCATCA TCATGTTCCT GTTCCTGCAG AACATCCGGG CGACTCTTAT TCCGACCATC GCCGTGCCGG TTGTTCTCCT GGGGACCATG GGGGTGCTGG CGGCCGCGGG GTTCTCCATC AACACCCTGA CCATGTTCGC GCTGGTTATC GTCATCGGCC TGCTTGTCGA CGACGCCATC GTCGTGGTGG AGAACGTGGA ACGGATCATG TCCGAGGAGG GGCTCTCTCC CCACGACGCC ACCATCAAGT CCATGGGGCA GATCACCAGC GCTCTTTGGG GAATCGCCAC CGTGCTGTCG GCCGTCTTCC TGCCAATGGC TTTCTTCGGC GGTTCCACCG GCGTTATCTA CCGCCAGTTC TCGATCACCA TCATTTCGGC CATGATCCTG TCGGTACTGG TGGCCCAGAT ACTGACGCCG GCCCTCTGCT CCACCCTGCT CAAGCCGGTT GAAAAAGGAC ATACCCCGGG TGAATGCGGC TGGTTCTGCC AGTTCTTCCG CCACTTCAAC AAGGGGTTCG ACTGGGCACG GGAGAAATAC GAAGGGATTG TCGGCCGCTC CTTCGGCAAG CCGGTCCGGT ACCTGGTGGT TTACGGCGGT ATCGTGGCGG TAATGGTGTT CTTCTTCCTG CGGCTGCCGA CGGCCTTCCT GCCGGACGAG GACCAGGGGT TCATCATCTG TCAGGTCCAG TTGCCCGCCG GAGCCACCAA GGAGCGGACC ATCAAGGTCA TCGAGGAGCT TGAGCACCAT TTCCTCGAGC GGGAGAAAAA GACCGTGGAG GCCATCATTA CCGTGGCCGG CTTCAGCTTC GCCGGTCGCG GCCAGAACAT GGGCCTCGCC TTCGTCAAGC TGAAGGATTG GGAGCTGCGC CCGACCCCCG ACCTCAAGGC GCCGGCCGTT GCCGGCAGGG CCATGGCGGC ATTTTCAAAG ATCAAAGACG GTATGGCCTT TGCTTTTTCA CCGCCGGCGG TGGTGGAGCT GGGGCAGGCC AACGGCTTTG ACTTCATGCT GCAGGACCGC AGCGGCCTGG GACATGACAA GCTGATGGAG GCTCGCAACC AGCTGTTGGG CATGGCCATG AAGAATCCGA AGCTGATGGC GGTTCGTCCC AACGGCCAGG ATGACTCCCC ACAGTTCAAA CTTGATATCG ATGATGTGCG GGCCGGAGCG CTGGGCGTGT CGCAGACCAG TATCAACGAA GTTCTTTCAA CTGCCTGGGG CAGTTCCTAC GTGAACGACT TCATCGAGAA CGGGCGGGTC AAGAAGGTCT ATCTCCAGGC CGACGCAAGG TACCGCATGC TGCCGGAAGA TATCGGCAAG TGGTATGTAC GCAATAACAA CGGGGAGATG GTGCCGTTCT CCGCCTTTGC CACCGCCCAC TGGCAATACG GTTCACCACG TCTGGAACGC TATAACGGTA TTCCGTCCGT GGAGATCATG GGCCAGGCCG CGCCGGGGGT GAGCACCGGC GAGGCCATGG CCGAAATGGA GAAGATGGCG GCTCAGCTGC CTGCGGGCAT CGGCTATGAA TGGACCGGTC TTTCCTATGA GGAAAAACAG GCGGGTGCCC AGGCTCCAGC CCTCTATGCC ATCTCGCTGC TGGTGGTGTT CCTGGCCGTG GCCGCCCTGT ACGAGAGCTG GACGATCCCC TTCGTCAACC TGCTGATGCT TCCCCTCGGC CTGGTGGGCG CGGTGACCGC CGTTACCCTG CGGATGCTTC CCAACGACGT CTATCTCCAG ATCGGCCTCC TGACCACCGT GGGCCTTTCC ACCAAGAACG CCATCCTGAT CATCCAGTTC ATCAAGGAGC AGCTGCATCA CGGGCACGAT CTGGTGGAGG CCACTCTCCT GGCGGTGAAG ATCAGGTTGC GGCCGGTCAT CATGACCTCG CTGGCGTTTT TCTTCGGCAC CCTGCCGCTG GCGCTCACCA AGGGGGCCGG GGCCGCGGCC CAGAACGCCA TCGGTACCGC CGTGACCGGC GGCCTCCTCT CGGCCACTTT TATCGACCTG ATTTTCATTC CGTTCTTTTT CGTGATGGTG TCGAAACTCT TTGCCAAAAA GCAGACTGCC GTACAGCCGC CCGCTGACAC AGCGTCGGAG GTGAATTGA
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Protein sequence | MSRFFINRPI FAWVISIMVM LGGLLAIKTL PVSQYPPIAP PQITINAMYP GASAQTVQDT VTQVIEQKLN GIDNLIYMSS TSDSAGAVAI NLTFKAGTDP NIAQVQVQNK LQLATPLLPQ IVQRQGIQVV KSTKNFLMIV GLVSEDGSLT RDTLTDYLVS NVQDIISRTE GVGEVTVFGS QNAMRIWLDP AKLNNFHLTT NDVIAAIQAQ NAQVSAGQFG GSPAVHGQQL NATITARTLL QTPEQFNNII LRTNPDGSTV KLKDVAEAKV GTENYDIEAR YKGKPLGGMA IRLAAGANAL DTGERVKAKM EELSRYFPAG MKVVYPYDTT PFVKISIKEV VKTLVEAVFL VFIIMFLFLQ NIRATLIPTI AVPVVLLGTM GVLAAAGFSI NTLTMFALVI VIGLLVDDAI VVVENVERIM SEEGLSPHDA TIKSMGQITS ALWGIATVLS AVFLPMAFFG GSTGVIYRQF SITIISAMIL SVLVAQILTP ALCSTLLKPV EKGHTPGECG WFCQFFRHFN KGFDWAREKY EGIVGRSFGK PVRYLVVYGG IVAVMVFFFL RLPTAFLPDE DQGFIICQVQ LPAGATKERT IKVIEELEHH FLEREKKTVE AIITVAGFSF AGRGQNMGLA FVKLKDWELR PTPDLKAPAV AGRAMAAFSK IKDGMAFAFS PPAVVELGQA NGFDFMLQDR SGLGHDKLME ARNQLLGMAM KNPKLMAVRP NGQDDSPQFK LDIDDVRAGA LGVSQTSINE VLSTAWGSSY VNDFIENGRV KKVYLQADAR YRMLPEDIGK WYVRNNNGEM VPFSAFATAH WQYGSPRLER YNGIPSVEIM GQAAPGVSTG EAMAEMEKMA AQLPAGIGYE WTGLSYEEKQ AGAQAPALYA ISLLVVFLAV AALYESWTIP FVNLLMLPLG LVGAVTAVTL RMLPNDVYLQ IGLLTTVGLS TKNAILIIQF IKEQLHHGHD LVEATLLAVK IRLRPVIMTS LAFFFGTLPL ALTKGAGAAA QNAIGTAVTG GLLSATFIDL IFIPFFFVMV SKLFAKKQTA VQPPADTASE VN
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