| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU2531 |
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| Symbol | |
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| ID | 2687804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | - |
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| Start bp | 2791476 |
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| End bp | 2794637 |
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| Gene Length | 3162 bp |
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| Protein Length | 1053 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637127221 |
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| Product | sensory box histidine kinase |
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| Protein accession | NP_953577 |
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| Protein GI | 39997626 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.606569 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTCC CCCGCAGTAT CCGCACCAAG GTGTGGCTCT GTGTTCTCGT GGCCTTCGTG
GGTTACCTGA TCGCAACCCT TTCCAGTTAC TACTCCAATC TACTTTTTTC CCACAACCTC
GACCACCTCA AGCGGGTCGA ATTTCCCCTG GCCCTCAATG GGAACGATAT CCTGAGCCTC
TACCGCAAGC AGTTGAAGCT CTACGAGGAT GCCTTTGTCA CCGGCGAGCG GGATGAAGCG
CTCAGGGCCA ATGAACTGGG GCGCGAGATC GTGACGAGCC TGGCCCGGGT AGCTGAGCTC
ACCCGGGAGG ACACCGAGCA CCGCTATGGC GACGTCGAGG CGCTCAAGTC CCGCTACGAG
GCCTATTTCC GGAAGGCGAC GGAGCTGTAT CCCCGGGTGC TCGGCAGCAC CGACACGTTC
CTGAGCGGAG AGATCGCCCG TCTCGGGGCG GACGGCCGCT TGATCCTGGT GGACTTCGAG
CGGATGTCGC GGGATTACGT CACCTCGGTC GAGCACCAGA TCGAGCGCAA CCGTGCGCTT
GCCCGCGATA CCTCGATCTA TCTTTTCGTC CTGTTCGGGA TGGTGGTACT GCTGGCGGCG
CCTGCCATCA CCTTTGTGGC CAACCGGCTC CTGATCCGCC CCCTGGAAGA GCTGCGCGGC
ATGGTTACCT CCTTTGCCGG GGGCAGTCTG GACCTTTCCG GACTCCCTGA CTACGATGCC
GGAGACGAGA TCGGCTCCCT CTGCGCCTCG TTCAGGTCCA TGGTGGAGGG GCTCCAGGAG
ACCACGGTCT CCCGCGACTA CGTGGACAAT ATCATCGAGA GCATGAGCGA CTGCCTGATA
GTGGTCGACA CCCGCGCCGC CATCCGGCGG GTGAATCGCG CCGCCCTGAC CATGCTCGGC
TACGATGAGG AGCAGTTGCT CGGCATGCCG GTCGGTGTCA TCTTCGCCTG GGAACGTGAC
AAGGAGCGCC TGCGGACCGA GGGGCTCAGG TGCTTTGTGG AGTCCATCGG CTCCAGTCCG
GCCGAATTCA CCTTCCTGAG CAGCGACGAA CGCCGGACCC CGGTACTGCT CTCCGCGTCT
CCCATGTTAG GCCGTGACGG CTCGTTCCAG GGATCGGTCT TCGTTGCGGT GGACATCGGG
GAGAGGAAGC GGACCGAGCA GGCCCTGCGG GAAAACGAGC AGCACCTGAA GAACATCCTC
GATTCCATCC ACGCGGGAAT CCTTGTCATC GACCCCCAGG ATCACCGGAT CGTGGATGCC
AACACCTTTG CCCTGGACAT GATCGGGGCG CCCAAGGGGC TCGTGGTGGA CCGGATCTGC
CACAATTTCG TCTGTAGCGC CGTTCAGGGC GCCTGTCCCA TCACCGACCT GCTCGAAAAC
ATGGACAACT CGGAGCGGCG CCTGCTGCGG TTCGACGGCA CGTCCATCCC GATCCTCAAA
TCGGTGGTGC CGGTCACCTA CCAGGGAAGG AAGCTGCTGA TCGAGAGCTT CATCGATATC
TCCGAGCGCA AGTGGGCCGA AGAAATGCTC CGCTACCTCA CCGAGGGGAC GGCTTCGGTG
ACGGGCGAGG AGTTTTTCCG TTCGCTCGTC CGGCGTCTCT CCTCGGCCCT CGGGACCCGG
TTCGCCTTTG TCACCCGCCT GCTGGACGGT TCTCCCGCCC GGATGCGCAC CCTGGCCTTC
TGGACCGGCA ACGGCTACTG TCCCACCATG GAGATGCCCC TGAACGGCAC CCCCTGCGAA
CGGGTCATCG CTGACAGCGA CATCCTGTTC CATCCCAGCG GCTTGGGACA GCTCTATCCC
TCCGCCGAAA CCATGAAGCG AATGGGTGTC GAGAGCTTCC TGGGCGTGCC GCTGTTCGAT
TCCCGCGGCA CCGCCATCGG CCACCTGGCG GTTCTGGACG ATAAGCCCAT GCGCGAGGAC
GAGGGGCACC GCTCCCTGTT GCGGATATTC GCGGCCCGGG CCGGGGCGGA GCTCGAGCGG
ATGAGGTGGG ACGAGGCCCT GCGCGAAAGC GAGACCCGCT ACAAGGATCT CTTCGAAAAC
GCCAACGACC TGATCCAGAG CGTGTCACCC TCGGGCGAGA TCCTCTACGT GAACCGGGCC
TGGCGCGAAA CGCTCGGCTA CAGCGAGGAG GAGGTGAAGG GGCTCACCTT TGATCAGATC
ATCGATCCGG AGTGCATTGG CCACTGCATG GGCGAGTTCC GCAGGGTCAT GGAGGGCCAG
AGCCTGGAGG CGGTGGAGGC CCGGTTCATG GCGAAAGATG GCCGCTCCAT CCTGGTGGAG
GGGAGTGTCA ACTGTAACGT GGTGGACGGC AAGCCGCTGG CCTCCCGGGG GATTTTCAGG
GATATCACCG AGCGGAAGCA CCATGAGGAC ACGCTCCGGA AATACGCGAC AGAGCTTGAG
CAGACCAACG AGGAACTGAA GGACTTCGCC TATATCGTCT CCCACGACCT GCGCGCGCCG
CTGGTCAGCA TCAAGGGGTT CTCCATGGAG CTGGTTACGG CTATGGATGA GCTCAGGGGG
GTCATAGCGG AGCTTTCCCC GAACATCGAG ATGATGACCC GCGAGCGGCT CCGCCGGCTC
TTCGAGCAGG ATATCGACGA GGCGGTCGGC TTCATCAACT CCTCGTCCCA GCGCATGGAT
ACCCTCATCA CCGCCATTCT CAACCTGTCG CGCCTCGGTC GCAGGGAACT CAAGACGGAA
CCGGTCGACA TGGGCGCTGT CGTGCGTTCG ATCCTCGACT CCCTGGCCCA TCAGATCGAG
ACGAACCGTA CCGAAGTGGC GATCCGCGAC CTTCCGGTCA TCACCGCGGA CCGGATTGCC
ATGGAACAGA TCATGGGCAA CCTGCTGGAC AACTCCCTCA AGTACCTGGA GCCCGGGCGG
CCGGGCCGTC TGGAGATCTG GGCCGATGTG GGCGGCGAGG AGTGCGTCTT CCATGTGAAG
GACAACGGGC GCGGCATCAG GGAGGAAGAA ATCCCCCGGG TCTTCGAACT GTTCCGCCGC
GCCGGCCGGC AGGATGTCCC CGGCGAGGGG ATGGGGCTGG CCTTCGTGAA GACCCTGGTG
CGGCGGCTGG GTGGCCGCAT CTGGTGCGAG TCCGAACCGG GCGTGGGGAG CACGTTCAGC
TTCACCCTGC CGTCTTCCTT TTCTCACAAA CTCCCGCTAT AG
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| Protein sequence | MKLPRSIRTK VWLCVLVAFV GYLIATLSSY YSNLLFSHNL DHLKRVEFPL ALNGNDILSL
YRKQLKLYED AFVTGERDEA LRANELGREI VTSLARVAEL TREDTEHRYG DVEALKSRYE
AYFRKATELY PRVLGSTDTF LSGEIARLGA DGRLILVDFE RMSRDYVTSV EHQIERNRAL
ARDTSIYLFV LFGMVVLLAA PAITFVANRL LIRPLEELRG MVTSFAGGSL DLSGLPDYDA
GDEIGSLCAS FRSMVEGLQE TTVSRDYVDN IIESMSDCLI VVDTRAAIRR VNRAALTMLG
YDEEQLLGMP VGVIFAWERD KERLRTEGLR CFVESIGSSP AEFTFLSSDE RRTPVLLSAS
PMLGRDGSFQ GSVFVAVDIG ERKRTEQALR ENEQHLKNIL DSIHAGILVI DPQDHRIVDA
NTFALDMIGA PKGLVVDRIC HNFVCSAVQG ACPITDLLEN MDNSERRLLR FDGTSIPILK
SVVPVTYQGR KLLIESFIDI SERKWAEEML RYLTEGTASV TGEEFFRSLV RRLSSALGTR
FAFVTRLLDG SPARMRTLAF WTGNGYCPTM EMPLNGTPCE RVIADSDILF HPSGLGQLYP
SAETMKRMGV ESFLGVPLFD SRGTAIGHLA VLDDKPMRED EGHRSLLRIF AARAGAELER
MRWDEALRES ETRYKDLFEN ANDLIQSVSP SGEILYVNRA WRETLGYSEE EVKGLTFDQI
IDPECIGHCM GEFRRVMEGQ SLEAVEARFM AKDGRSILVE GSVNCNVVDG KPLASRGIFR
DITERKHHED TLRKYATELE QTNEELKDFA YIVSHDLRAP LVSIKGFSME LVTAMDELRG
VIAELSPNIE MMTRERLRRL FEQDIDEAVG FINSSSQRMD TLITAILNLS RLGRRELKTE
PVDMGAVVRS ILDSLAHQIE TNRTEVAIRD LPVITADRIA MEQIMGNLLD NSLKYLEPGR
PGRLEIWADV GGEECVFHVK DNGRGIREEE IPRVFELFRR AGRQDVPGEG MGLAFVKTLV
RRLGGRIWCE SEPGVGSTFS FTLPSSFSHK LPL
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