Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU2471 |
Symbol | |
ID | 2687440 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 2709108 |
End bp | 2710412 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637127161 |
Product | group II intron, maturase |
Protein accession | NP_953517 |
Protein GI | 39997566 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3344] Retron-type reverse transcriptase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.546508 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCGTGG AGCGCGTCAT TGACCGGCCA ACTCCGGAAG AGCACCTACT GGAGCGGATA CTTGCCACAG AGAACATGGA CCTGGCGTGG AAACGGGTGC GGGCCAACAA GGGCGCACCT GGCGTCGATG GTGTTACCAT CGACGCGTTC CCCGAACGGT TCCGGCCCCT CTGGGGCGAT ATCCGTGCAT CGCTTGCAAC AGGTACCTAC CAACCACAGC CGGTCCTTCG AGTGGAAATA CCCAAACCAA CGGGCGGCAC CCGCCCGCTG GGGATTCCCA CCGTCCTTGA CCGGCTGATC CAACAGGCAA CAGCCCAGGT GCTCACGCCG ATCTTCGATC CGGAATTCTC CGCATCGAGT TTCGGGTTCC GCCCCGGCCG CTCGGCACAC AATGCCGTGC GGCAGCTGCG GGAGTATCTG CGGCAGGGCT ACCGCATTGC CGTGGACATC GACCTTGCCA AGTTCTTCGA CACGGTCAAT CACGACCTCC TCATGACAAT GGTGGGGAGG AGGGTCCGCG ACAAGCGGGT TCTCACCCTG ATCGGCAGGT ATCTCAGAGC CGGGGTGGAG GTTGACGGGC GGCTGGAAAA GACCCGCATG GGCGTACCCC AAGGGGGTCC GCTTTCCCCG CTTCTCGCCA ACATCCTCCT CGACCACCTG GACAAGGAGC TTGAGAGCCG TGGCCACAAG TTCGTCCGTT ACGCCGATGA TTTCGTCATT CTGGTGAAGA GCGAGCGTGC CGGCGAGCGG GTCATGGGGA GCGTCAGGAA GTATCTGACG AACAAACTCA AGCTCACGGT CAACGAAGAC AAGAGCAAAG TCGCCAGAAG CGGCGACTTG AGCTTTCTTG GCTTTGTCTT CAAGGGAACC AAAATCCTCT GGTCTGACCA GGCGTACAAG GAGTTCCGGC GCCGGGTCAG GAAGTACACC GGCAGGAGTT GGTTCGTCTC CATGGAGTAC CGACTGAACA AGCTGTCGAC CTACCTCCGC GGCTGGATGG GGTACTTCGG CATTGCCGAA GCCTACCGTG ACATCCCGGA GATCGACGGC TGGATACGGC GGCGGGTGCG GCTGTGCTAC TGGAAGCAGT GGCGGTGGTG CCGCACCAAG ATTCGGAACC TGCTCAAACT GGGTGTACAG CTTGGCACAT CCATCAGAGC AGGGCTGAAC CGCAACGGTC CGTGGGCCAT GTCCCGCAGG CTTGCCGCCC AGCACGGTAT GACCAACCAG TGGCTGAAGG ATCAAGGACT TGTATCTGTC AAAGAACTGT GGGTGAAGAT CCATTACCCG GCCACGGCCC GGTAA
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Protein sequence | MPVERVIDRP TPEEHLLERI LATENMDLAW KRVRANKGAP GVDGVTIDAF PERFRPLWGD IRASLATGTY QPQPVLRVEI PKPTGGTRPL GIPTVLDRLI QQATAQVLTP IFDPEFSASS FGFRPGRSAH NAVRQLREYL RQGYRIAVDI DLAKFFDTVN HDLLMTMVGR RVRDKRVLTL IGRYLRAGVE VDGRLEKTRM GVPQGGPLSP LLANILLDHL DKELESRGHK FVRYADDFVI LVKSERAGER VMGSVRKYLT NKLKLTVNED KSKVARSGDL SFLGFVFKGT KILWSDQAYK EFRRRVRKYT GRSWFVSMEY RLNKLSTYLR GWMGYFGIAE AYRDIPEIDG WIRRRVRLCY WKQWRWCRTK IRNLLKLGVQ LGTSIRAGLN RNGPWAMSRR LAAQHGMTNQ WLKDQGLVSV KELWVKIHYP ATAR
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