Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU2363 |
Symbol | |
ID | 2688171 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 2589290 |
End bp | 2591134 |
Gene Length | 1845 bp |
Protein Length | 614 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637127054 |
Product | chloride channel family protein, putative |
Protein accession | NP_953410 |
Protein GI | 39997459 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0038] Chloride channel protein EriC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.325858 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCTTG AGTTTCCCGG AAAATCTGCA CGGTGGACCA CACCGCTGAT CCTCATCAGG GATCTTCATC TGCTGCGCCG GTTCGTCCGA ATGCGGCGGG CGGTTTTTTC TCTCCTCTCC CGGTTTCGGA TCAGCGAAAA TACGCTCATG GCGATTCTCG CCGTGGGGAT CGGCCTGTTG GCGGGACTGT GCAACTACGC CTTCCGCTCG TGCATCGACC TGTTCCGGTG GCTCATCATC GACAGCGGCG GGCAGTTGAC CGGCTATTCG CCCTATGCCT GGAACGCGAG CCGTCTCTGG GCTATCGCCT TTCCCATCAC CGGCGCCATC GTCATGTTCC CCCTGTTCAT CAAATTCAGG GAAGACATGG CCTTCGGCTT CCCCCGGTTT CTGGAAACGG TCAATCTGCG GGGCGGGCGA CTGCCGCTCA GGCTCATGTT CACCAGGGGG ATTTCGTCGG CGCTCACCAT CGGCTCCGGC GGCTCCGCCG GCCAGGAAGG CCCCATCGCC CAGATCGGCG GCACGGCCGG CTCCGTGGTG GGGCACCTGC TCGGCATGTC GGGAGAGCGT CTCAAGGTCC TCATCGGCTG CGGGGTCTCC GGCGGAGTTG CCGCCACCTT CAATGCCCCC CTTGCCGGGG TGTTTTTCGC CCATGAAATC GTCCTTCTCT CCTCCTTCGA GCTCTCTTCC TTCACGAGCA TCGTCATCTC GTCCGGCATG GCCACCGTTG TCTCCCGGGC CATGTATGGC GACATCCCCG CCTTCGACGT GCCCGCCTAC CAGCTCGTTC ACCCCCTCGA ACTTGCCTTC TACGCCCTGC TCGGGGTGGT GTGCGGCTGC CTCGCGGCCC TCTTCATAAC AGGCTACGGG AAAACCAGGG ACATGTTCTC GCGCCTCCCT ATCAATCCAC TGTGGAAACC TCTTCTGGGC GGGTTTCTCG TCGGCTGCGT CGCGGTTCTT CTGCCCCAGG TCCAGGGCAA CGGTTACGAG TTCATCGAAA AAGCCGTTTC CAACGACGTG GGGTGGCTCC TTGTCACGCT CCTTATCGTC GGCAAGATGG TCGCCACCTG CGTAACGGTC GGCTCGGGGC TGCCGGGCGG GACCTTTGCG CCGTCCCTGT TCATCGGTTC GGTCACCGGC ATGAGTTTCG GCTTCCTGGC GAACAGCCTC TTCCCGTATC AGACGGCAAC GCCGGGCGCC TATGCCCTGG TGGGGATGGG CGCGTTCCTC GCATCGGTCA CCCACGCGCC CATGACCGGC ATCTTCCTGC TCTTCGAGAT GACCGGTTCC TACAAGGTCA TTGTGCCGAT CATGCTCGCC TGCGCCATCG GCACCGCCGT GGCCCGCCAC TTCCACAAAG ACGGCATCGA TACTGCCGAC CTGGCCGCCC AGGGGATCGA CCTGCGGGCC GGGCGAGAAC AGAGGGTCCT GGAGCGAATC CGGGTCAAGG GGGTCATGAT GCGCGACCCG GAGATACTCC CGGAAACCAT GACCATCCGC CAGTTCCTGG CCCGCAGCCA TTCGCCGCGC CAGACCACCT TCCCCGTCGT CACTGGCGGG GGAGAGCTTT CCGGGGTCGT GGTCATCCAT GACTTCCTGG GGATCGCGTT CGAGCAGGAG CTTCTCGACC AGGTCACCTT GGGCGAAATG GCCGCCGTGG ACATTTTGAC CGTCACCAGC GAAGACACTC TGGCGAAAGC ACTCCAGATC TTCGAGCGCA CGCCCCTGGA CGAGCTTCCC GTTGTGGAGC CCGGCGGACA AAGGCGGGTG GTCGGCATTC TCACCCGCCA CGCCATTACC GGTGCGTACA ACAGGGCAAT GGTGACACAA TCGCTCAAGG AGTGA
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Protein sequence | MKLEFPGKSA RWTTPLILIR DLHLLRRFVR MRRAVFSLLS RFRISENTLM AILAVGIGLL AGLCNYAFRS CIDLFRWLII DSGGQLTGYS PYAWNASRLW AIAFPITGAI VMFPLFIKFR EDMAFGFPRF LETVNLRGGR LPLRLMFTRG ISSALTIGSG GSAGQEGPIA QIGGTAGSVV GHLLGMSGER LKVLIGCGVS GGVAATFNAP LAGVFFAHEI VLLSSFELSS FTSIVISSGM ATVVSRAMYG DIPAFDVPAY QLVHPLELAF YALLGVVCGC LAALFITGYG KTRDMFSRLP INPLWKPLLG GFLVGCVAVL LPQVQGNGYE FIEKAVSNDV GWLLVTLLIV GKMVATCVTV GSGLPGGTFA PSLFIGSVTG MSFGFLANSL FPYQTATPGA YALVGMGAFL ASVTHAPMTG IFLLFEMTGS YKVIVPIMLA CAIGTAVARH FHKDGIDTAD LAAQGIDLRA GREQRVLERI RVKGVMMRDP EILPETMTIR QFLARSHSPR QTTFPVVTGG GELSGVVVIH DFLGIAFEQE LLDQVTLGEM AAVDILTVTS EDTLAKALQI FERTPLDELP VVEPGGQRRV VGILTRHAIT GAYNRAMVTQ SLKE
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