Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU2297 |
Symbol | |
ID | 2687190 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 2514738 |
End bp | 2517026 |
Gene Length | 2289 bp |
Protein Length | 762 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637126990 |
Product | sensory box histidine kinase |
Protein accession | NP_953346 |
Protein GI | 39997395 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2202] FOG: PAS/PAC domain [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00806153 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCTCA AACAAAGAAT GACACTCGCC ATTTCGGCGT TGATGGTTTT GTTCGCCGTG TTCATGGCGG TCGTTGCGGT CGGCTATTTC GAGCGCAAAC TCAACGAGAC CATTATCGAT CAGCAAAGTT CGCTGGTCAG CTACATTGCC GGTGAAATCG ACAATACCCT CGGCATTGCC CAGGGTCTTC TCGTTGCCAG CGCCACCTTC GTTCCCGCCG ACGCCCTTGA TTCCCCGGAG CGAACCCGGC GATTCCTCCA GAGCAGGACA AGCCTCAACA AACTGTTCGG CAACCGGTTG CTGGTCATCT CCGCCGACGG ACGGCTGGTC GCCACATCCC ATAACGTTGC CGGAAGCAAC CCTCCGTCCA ATTTTACCGA CACCCCCTTT TTTCGCGAAA CTCTCAGGAA ACGAATTCCA CTCATCTCCG AGATGACGAC CTGCTGTATC TCGCCCCATT CTTCGGAAAT CGTCATGACC GCGCCGATCT TTGGCCCGGG CAACCAGGTA CGGGGAGTTC TCGCCGGGAC CATCGCCCTG CGTGAGACGA ACCTGCTGTC GCGTTTCGGC ACCCTTCGCA TCGGCAAAAC AGGCTATCTT CAGCTGGCAA CGGCTAACCA GACATTGATA GTGCACCCTG AGCGCGAGTG TATCCTGCAT CAGGTCGGAC CTCTACACGG CAATCTCGTG ACCGACGCCG TCAAGGGGTT TTCCGGCACC CGGCGTACGG TGAACAACAA GGGAGTGCCC ATGTTCACCA CGGCGCGCAA GCTGGCGTTG AAAGATTGGG TAGTGATGGC CAACTACCCG GAAAAAGAGG TGTTGGCGCC CATACGTGCC GCCAGGGGTG TTATGGGGGT CTTTACGGTA GCGGGGGTTG GCGCGCTGAT CATTCTCACC TCCCTATCGA TCGGCTATCT CACCCGTCAA CTGACAGCAT TCACCGAGCA TATCCGCGGG CTTTCCGAAA AGGAGGGCGC CGACCGCCGG TTCCCCATGC CCGATACCGG TGACGAGATC TCCGCACTGT CGACCGCATT CAATGAGATG GTGACGTCGC TTGACCAGCG GACCGAGAGC CTGTGCGAGA GCGAAGAGCG GTTTCGCAGT ACGTTCGAGC AGGCTGCGGT CGGTATTGCC CATGTGGATA TGGATGGACG GTTTATCAGG CTCAATAGTC GCTTCAGCGA CATCCTCGGC TATGCCGAGC ACGAATTGCT CGGTATGACC GTTGCCGATA TTACCTGTCC GGAATATCTG GAGAGCTGCC AATCCTGCCG GCAGCAACTT CTTGAAGGAA AGCGTTCGTG TGCCGCAGAA AACCGCTATC TCCGCAAAGG GGGAGCACAC GTCTGGGTCA ACCAGACGGC ATCGGTACTG CTGGATTCAT CGGACAAGCC AAAGTATTTC ATCATGGTCA TCGAGGATAT TTCGGCCCGG AAAGGGGCCG AGGAAGAGGT CCGCCGGCTC AATGCGGGCC TTGAGCAGCG GGTCGCCGAG CGGACCGCTG AACTGGAGTC GGTCAACATC CGTCTCATGG CGGAAATTGA GCAGCGGGCC CAGGCACAGG AGGAGATCGG TTGGCTGAAC GAGGATCTCA TGCGGCAGAA GGCGGCCCTG GAAGCCGCGA ATCGAGAACT GGAGGCGTTC AGCTACTCGG TTTCCCATGA TCTGCGAGCA CCCCTGCGGC ATATTGCCGG CTATGGCCTC GCCCTTCGGG AAGACTACGG CGGGCAGCTC GATCCGCAGG CTCTCGAGTT CATCGAGCGG ATGAACGCAG CCGCTCGACG GATGGAGCAG CTGATCGAAG CTATGCTCAA CCTGTCGCGG CTGGGGCAGG GTGACGTCAA GCGTATGCCT ATCGACATGA GCGCCATGGC ACGCGAGGTC GTGGCCGGCT TGCGCGAGGC CGAACCGAAC AGGAATGTAG TGATTACCAT TGCCGATGGG CTCACTGCCA CAGGGGATCC CCAGCTTATG CGCATTGTTC TGGAAAATTT ACTGGGAAAT GCGTGGAAAT ATACGGGCAG ATCGCCGCTG GCCGAAATTG AGTTCAGTGC TCTGACCGAC GGGCAGCCGG CGTTTTGCGT GAGGGATAAC GGAGCGGGAT TCGACATGGC CTTTGCCGAT AGGCTGTTCG GACCGTTCCA GCGGTTACAC CGTGATGACG AATTCGCCGG AACCGGCATC GGCCTTGCCA CGGTCCAGCG CATTATCAAC CGGCACCGGG GAAGCATCTG GGCCGAGAGT GCACCCGGCG CCGGTGCTGT GTTCTACTTC TCAATCTGA
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Protein sequence | MNLKQRMTLA ISALMVLFAV FMAVVAVGYF ERKLNETIID QQSSLVSYIA GEIDNTLGIA QGLLVASATF VPADALDSPE RTRRFLQSRT SLNKLFGNRL LVISADGRLV ATSHNVAGSN PPSNFTDTPF FRETLRKRIP LISEMTTCCI SPHSSEIVMT APIFGPGNQV RGVLAGTIAL RETNLLSRFG TLRIGKTGYL QLATANQTLI VHPERECILH QVGPLHGNLV TDAVKGFSGT RRTVNNKGVP MFTTARKLAL KDWVVMANYP EKEVLAPIRA ARGVMGVFTV AGVGALIILT SLSIGYLTRQ LTAFTEHIRG LSEKEGADRR FPMPDTGDEI SALSTAFNEM VTSLDQRTES LCESEERFRS TFEQAAVGIA HVDMDGRFIR LNSRFSDILG YAEHELLGMT VADITCPEYL ESCQSCRQQL LEGKRSCAAE NRYLRKGGAH VWVNQTASVL LDSSDKPKYF IMVIEDISAR KGAEEEVRRL NAGLEQRVAE RTAELESVNI RLMAEIEQRA QAQEEIGWLN EDLMRQKAAL EAANRELEAF SYSVSHDLRA PLRHIAGYGL ALREDYGGQL DPQALEFIER MNAAARRMEQ LIEAMLNLSR LGQGDVKRMP IDMSAMAREV VAGLREAEPN RNVVITIADG LTATGDPQLM RIVLENLLGN AWKYTGRSPL AEIEFSALTD GQPAFCVRDN GAGFDMAFAD RLFGPFQRLH RDDEFAGTGI GLATVQRIIN RHRGSIWAES APGAGAVFYF SI
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