Gene GSU2278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGSU2278 
SymbolprfB 
ID2686956 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameGeobacter sulfurreducens PCA 
KingdomBacteria 
Replicon accessionNC_002939 
Strand
Start bp2494365 
End bp2495484 
Gene Length1120 bp 
Protein Length372 aa 
Translation table11 
GC content61% 
IMG OID637126971 
Productpeptide chain release factor 2 
Protein accessionNP_953327 
Protein GI39997376 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID[TIGR00020] peptide chain release factor 2 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCAGAG AAGAAGTTGC ACGGGTCGAA AATTTCGGGG AGCGGATTGC CAAGCTCCGG 
GGGTCTCTTT GACATAGACA GCAAGCGGGA AGACATCCAG GAACTGGAAG CGCAGATCGC
CGCTCCCGGC TTCTGGGACA ATAACGAGGA AGCCCAGAAG GTCCTGCGGG AGAGAACCCG
CATCGAAAAA CTCATAGACC TGTGGGATCG CCTCAACCGC CAGGCGGACG ACATCCGCGT
CCTCATCGAA TTGGGAGAGG AAGCCCAGGA CGAGGCCACA CTCGACGAAG TCCGCGCCCT
CAACGACAGC CTTGAGCGCG AAGTGGAAGG GGCCGAATTC CAGCGCATGT TGTCGGGCCC
CCACGACAAG AACAGCTGTT TCGTTTCCAT CAATGCCGGC GCCGGCGGAA CCGAGGCCCA
GGACTGGGCC GAGATGCTGC TCAGGATGTA CCTGCGCTAC TGCGAGCGCA AGGGCTGGAA
GACCGAAATC ACCGACTTCC AGGCGGGAGA CGAGGCCGGG GTGAAGTCGG CGACCTTTAC
GGTTGACGGT GAGTACGCAT ACGGCTATCT TAAGGCCGAG GCCGGGATTC ACCGCCTCGT
GCGGATTTCC CCCTTCGACA GCAACGCCCG CCGGCATACC TCCTTTGCCT CGGTGTTCGT
CTTCCCCGAA ATCGAGGACG ACATCGAGAT CAAGATTGCC GAGTCGGATC TGCGGGTCGA
TACCTACCGT TCCAGTGGCG CCGGCGGTCA ACACGTAAAC ACCACCGACT CCGCCGTCCG
GCTTACTCAC CTTCCCACGG GCATCGTGGT CGCCTGCCAG TGCGAGCGAA GCCAGCACCT
GAACAAAGCC ACGGCGCTGC GGATGCTCCG GGCGAAACTC TACGAAAAGG AGCTCCAGGA
GCGCGAAGTC CAGGCCTCCG AACTGGCCGG CGAGAAAAAG GATATCGGCT GGGGAAGCCA
GATCCGCTCC TATGTGCTCC ACCCCTATAA GATGGTCAAG GATCTGCGGA CCGGCGTCGA
ATCGGGCAAC CCCGACGCGG TCCTGGACGG TGCACTGGAG GATTTCGTTG TAGCGTTCCT
CATGGGGGTG CGGCGCGATG TGAAAGACTC CGACGAGTAA
 
Protein sequence
MFREEVARVE NFGERIAKLR GSLDIDSKRE DIQELEAQIA APGFWDNNEE AQKVLRERTR 
IEKLIDLWDR LNRQADDIRV LIELGEEAQD EATLDEVRAL NDSLEREVEG AEFQRMLSGP
HDKNSCFVSI NAGAGGTEAQ DWAEMLLRMY LRYCERKGWK TEITDFQAGD EAGVKSATFT
VDGEYAYGYL KAEAGIHRLV RISPFDSNAR RHTSFASVFV FPEIEDDIEI KIAESDLRVD
TYRSSGAGGQ HVNTTDSAVR LTHLPTGIVV ACQCERSQHL NKATALRMLR AKLYEKELQE
REVQASELAG EKKDIGWGSQ IRSYVLHPYK MVKDLRTGVE SGNPDAVLDG ALEDFVVAFL
MGVRRDVKDS DE