Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU2271 |
Symbol | lysS |
ID | 2686982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 2487384 |
End bp | 2488859 |
Gene Length | 1476 bp |
Protein Length | 491 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637126964 |
Product | lysyl-tRNA synthetase |
Protein accession | NP_953320 |
Protein GI | 39997369 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGAGT TGAGTGAGCT GTTGCTCCAG AGGCGGCGCA AGGTCGACGC CCTCTGGGAA GCGGGGATCA ATCCCTACCC GAATGATTTC AAACCTCTCC ATACGTCTGC CGATTTCAGG GAGGCCTATG GCACCGTGGA TACCATTGAG GATGATCCCC GCAGCTTTAC CGTCGCGGGC CGTATCATCG CGCGCCGCTC CTTCGGCAAG GCTGCGTTTA TCCAGATCCA GGACCGTAAG GGACGGATGC AGGTCTACGT ACGCAAGGAT ACGGTGGGCG ACGAGGCGTT CGAGGCGTTC GAGACTTTCG ATATCGGCGA CATCGTCGGT GTCGGCGGCA CCCCGTTCCG GACCAAGACC GGCGAGCTCA CTCTCAATGC CGCGTTCATC CGTCTCCTGA CCAAGTCGCT CCAGCCGCTT CCCGAGAAGT TCCACGGGCT CACGGACGTT GAGACGCGCT ATCGCCAGCG CTACGTGGAC CTCATCGTGA ACCCCGAGGT GCGCGAGGTG TTCGTCAAGC GGTCCCGCAT CGTCAATCTC ATCCGCGAAT TCATGGTGCG CAAGGATTTT CTCGAAGTGG AAACGCCCAT GATGCAGCCG ATCCCCGGCG GTGCCACGGC GCGCCCCTTC GTGACCCACC ACAATGCCCT CGATATGCAG CTTTTTCTTC GGATCGCACC GGAGCTGTAC CTGAAGCGGC TCGTGGTCGG CGGCTTCGAG CGGGTCTTCG AGATCAACCG TAACTTCCGC AACGAGGGGA TTTCAGTGCG CCACAACCCC GAGTTCACCA TGATGGAGTT CTATCAGGCC TACGCCACCT TTGAAGACCT GATGGATTTC ACGGAGGAAC TCCTCTGTCA TGTTGCGCAG GAAGTGCTGG GCACCCTCGA TTTCACCTAC CAGGAGATGC CGATCAGCTT CCAGCGCCCC TGGAAGCGGC TCGCCGTTGT CGAGGCGATT CTGGAATACG GCGACATCGA CGCCAAGTCC CTGGCGGACC GGGATCTGGC CTATGCCTAC GCCCAGCGGC TGGGGCTCGA CCTGCCCGCC GACGTGGGGT ACGGCAAGCT CATTACCGAG ATTTTCGAGG AAGTGGCGGA AACAAAACTG ATCCAGCCGA CGTTCATTAC CGCCTATCCC ACCGAAGTGT CACCCCTTTC CCGCAAGAGC GACAAGGATC CGGAGATCGT GGACCGGTTC GAGCTGTTCA TTGCCGGTCG CGAGATGGCC AACGCCTTCT CCGAGTTGAA CGACCCGGTG GACCAGAAGG AGCGCTTCCT CGCCCAGGTG GCGGCCAAGG CCAAGGGCGA CGACGAGGCC CACTACATGG ACGAGGATTA CATCCGCGCG CTTGAGTTCG GCCTTCCCCC CACGGCGGGG GAGGGGATCG GCATCGACCG GCTCGTGATG CTGCTGACCG ATTCACCTTC GATTCGCGAC GTCATTCTCT TTCCGCAACT ACGCAAGGAA AAATAA
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Protein sequence | MEELSELLLQ RRRKVDALWE AGINPYPNDF KPLHTSADFR EAYGTVDTIE DDPRSFTVAG RIIARRSFGK AAFIQIQDRK GRMQVYVRKD TVGDEAFEAF ETFDIGDIVG VGGTPFRTKT GELTLNAAFI RLLTKSLQPL PEKFHGLTDV ETRYRQRYVD LIVNPEVREV FVKRSRIVNL IREFMVRKDF LEVETPMMQP IPGGATARPF VTHHNALDMQ LFLRIAPELY LKRLVVGGFE RVFEINRNFR NEGISVRHNP EFTMMEFYQA YATFEDLMDF TEELLCHVAQ EVLGTLDFTY QEMPISFQRP WKRLAVVEAI LEYGDIDAKS LADRDLAYAY AQRLGLDLPA DVGYGKLITE IFEEVAETKL IQPTFITAYP TEVSPLSRKS DKDPEIVDRF ELFIAGREMA NAFSELNDPV DQKERFLAQV AAKAKGDDEA HYMDEDYIRA LEFGLPPTAG EGIGIDRLVM LLTDSPSIRD VILFPQLRKE K
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