Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU2198 |
Symbol | miaB |
ID | 2685659 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 2410541 |
End bp | 2411881 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637126891 |
Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
Protein accession | NP_953247 |
Protein GI | 39997296 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.972973 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACGGAAA ACAAGTATCT GTATGTAGAA ACATTCGGAT GTCAGATGAA TGTCAACGAC TCCGAAAAGA TCGCGACGCT CCTGAAAGAT GAGGGGTATC TCCCCACCGA CGATCCGGAA CGGGCCGACT TGGTCATTCT CAACACGTGC AGCGTGAGGG CCAAGGCCGA GCAGAAAGTA TACGGGCACC TTGGCCGGTT CAAGGGCGTC CGGAGCAGGA AGAAGGGATT CCTGCTCGGC GTGGGGGGGT GTGTGGCACA GCAGGAGGGA GAGCGCCTGC TGCAGAAGGT TCCCTGGCTC GATCTGGTCT TCGGCACCCA CAATCTCCAC CTGCTGCCGG AGATTGTGCG GGCGGCCGAG CGGGGCGAGC GCCGGGCCGA GGTGGGGTTC ATCGACAACG AAACCCGGCT CGACCTGTTC CCCGAGACAG GTGGAGAGGG TGGTGTCACC CGCTTTGTGA CGGTGATGCA GGGTTGTGAC AATTTTTGTT CCTACTGCAT TGTCCCCTAT GTGAGGGGGC GCGAGATAAG TCGCCGTTCA TCCGACATAA TTGACGAGGT GCGAAAGTCC GTTGCGGAGG GTGTCAAGGA AGTGACTCTT CTGGGGCAGA ATGTCAACTC TTATGGTCTC AAGACCGAGG GAGAGTTGTC GTTCGCCGGA CTCATCCGTC GCATTGCCGA GGTGGAGGGG CTTGAACGGA TACGTTTCAC CACGTCACAC CCGAAGGATA TCTCGCCCGA GCTCATCGCC TGCTTCGCCG AGGTACCCAA GCTGTGCGGC CACATTCATC TGCCGGCCCA GTCGGGGAGC GATGCGGTCC TTGCGCGCAT GAACCGGGGA TACACCCGGG CCGGGTACCT CGAAAAGGTG GAGGCCCTCA GGGCAGCCCG GCCGGGTATC CAGTTCACGG GAGACATGAT CGTGGGCTTC CCGGGTGAGA CGGAAGAGGA CTTCCAGGCA ACCATCTCGC TCATGGAGGA AGTGCGCTAC GCCGATCTCT TTTCCTTCAT CTACTCGCCG CGCCCTGAAA CGGCCGCGGC CGGTATCCGG GATACGGTGA GCCGGAAGGA GAAGCAGTCG CGCCTCGACC GGCTCCAGAC ACTCCAGCAG CAGATGAAGC GCGAGCGCAA CATCAGCTTT GTCGGCACCC GCCAGCTTGT CCTGGTGGAG GGGGTGAGCA AGCGAGGCGA TCAGCTCTAC GGTCGCATCG ACGGCAACCG GATCGTCAAC TTCGCGGCCG ACCAGTCGCT CATCGGAACC ATGGCAGAGG TAACCATCAC CCAGGACTAT CAGAATTCGC TGCTGGGCGA AATCGTCACC GATAAAGGGG ACGCACGGTA A
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Protein sequence | MTENKYLYVE TFGCQMNVND SEKIATLLKD EGYLPTDDPE RADLVILNTC SVRAKAEQKV YGHLGRFKGV RSRKKGFLLG VGGCVAQQEG ERLLQKVPWL DLVFGTHNLH LLPEIVRAAE RGERRAEVGF IDNETRLDLF PETGGEGGVT RFVTVMQGCD NFCSYCIVPY VRGREISRRS SDIIDEVRKS VAEGVKEVTL LGQNVNSYGL KTEGELSFAG LIRRIAEVEG LERIRFTTSH PKDISPELIA CFAEVPKLCG HIHLPAQSGS DAVLARMNRG YTRAGYLEKV EALRAARPGI QFTGDMIVGF PGETEEDFQA TISLMEEVRY ADLFSFIYSP RPETAAAGIR DTVSRKEKQS RLDRLQTLQQ QMKRERNISF VGTRQLVLVE GVSKRGDQLY GRIDGNRIVN FAADQSLIGT MAEVTITQDY QNSLLGEIVT DKGDAR
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