| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU2044 |
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| Symbol | |
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| ID | 2687989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | - |
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| Start bp | 2239587 |
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| End bp | 2241875 |
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| Gene Length | 2289 bp |
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| Protein Length | 762 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637126735 |
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| Product | sensory box/GGDEF family protein |
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| Protein accession | NP_953093 |
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| Protein GI | 39997142 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGAATC TCAAGCGATA TAATGATGGC CTGTTCAAGC TGGATCTCTG GATCAGGCGA
CTGCTGACCA TTGGTGAGTC GAACGAACTC TACACAGCCC TCTGCGACGG TGTCTGCGAC
ATCGTGGGGG CCGGTACCGC CGTCTTCACC ACCATCGATA TGCAGGCCGG TACCCTGACC
TACATGGCCG CGTCCGGGGG CTGGAATGCC ATGGTGAAAG GGCTGGCAGT CCCCATGAAG
AGCGGGAATC TGTGCGCATC AGTGGCCGCC TGCGGTACTC CCCTGCGGAT CGACCAGATA
TCCTCCCGCA CTGACTCCTG CGAACTCTTG CAGGTGATGG ACATGGATGC GGCGGTTCTG
GTCCCCGTCC TGGAAGAAGG CAGGGTTACG GCCTGTCTGT CCGCGTTCCG GGTTGGCAAT
CCGTTCGACC AGATCGACGA GCAGCTTCTT CAGCAGTATG CCCATACCGC ATCCATGGTA
CTGCGCACCG TTCGCCTCAT GGTCGATCTG CGGCACCACG CCGCCATGCT CGAAGAGGAA
AACGATGAGC GCACCAGGGC CGAGCAGAAG CTGGCCGAAA CCAATGTCTT CCTCAATTCC
GTGGTTGACG GTGTGGCCGA GCCCATGGTG GTGGTCGGGC TCGATCGCCG TGTCATCATG
ACGAACCGGG CGGCTCGCGA CTTTTTCCAG ATATCCGACG TCGGCAGTGA CGAGGCCTGC
CATCGACTTA TTCACCATCG CGATACCCCC TGCGTCAGGG AGGAGGGGAT GCAGTGCCCC
CTGCTCGATG TACGGACGGC GAAGCGTCCG GTTATTGCCA CCCAGGAGCA TCGCGACCGG
AGCGGGGACA AGCGCGTGGT GGAGGTTATG ACGTCTCCGC TGCTCGGCAG CGACGGCGTA
GCCATCGGGA TCATCGAGGC GTTCCGCGAT ATCACTGATC GTCGCCAGGC CGAGGAAACC
ATCCGGCAGA TGGCGTACTA TGACTCGCTT ACCGGACTGC CCAACCGCAG GCTCTTCAAC
GACCGGCTCC GCCAGTCCCT TGCCCTGGCA CAGCGGAACA AGCGCCTTCT GTCAGTGTTG
TTTCTCGATC TGGACCGGTT CAAGCTGATC AACGATACCC TCGGGCATGC GGTGGGAGAC
AAGCTCCTCA TGCAGGTGGC CAAGCGCCTC AAGGGGGTCT GTCGCCGCGA CGGCGACACC
GTGGCCCGGC AGGGGGGCGA CGAATTCATC ATCAATCTGT CGGTCATTTC CGACGTGAAA
GATGCCCTGA AAGTGGCCCA GAAGATTATC GACAGCCTGC GGACCCCCTT CGTCATTGAT
GGGCACGAGT TGTTCATCAC CACGAGCATC GGCATCAGCG TGTTTCCCTA CGATGGCCGC
ACGAGCGACG CCTTGGTGAA GAACGCCGAT TTTGCCATGT ATCGGGCCAA AGAGCAGGGG
CGGAACAACT GCCAGCTCTA CACCCCTGAG ATGAACAGCA AGGCATTCGA GCGGCTTTCT
CTTGAAAACA ACCTGCGCAA GGGGCTTGAG CGGGAAGAGC TGGTGCTCTA CTATCAGCCC
AAGGTCAACG TTGAGGACGG GCAAATCTCG TGCATGGAGG CCCTGGTCCG CTGGCAGCAC
CCCACCATGG GGCTCGTGCC GCCGGCGCGC TTCATCCCCC TCGCGGAAGA AACGGGGCTC
ATCGTTCCCC TGGGCGAATG GGTGTTGAGG ACCGCGTGCC GCCAGAACCG GGAGTGGCAA
AAGGCCGGCT ACCCACCAAT GCAGGTGGCG GTTAACATTT CTCCCCGCCA GCTCCAACAG
GGGAATCTGG TGGATGTGGT GGAGCGGGCA CTCTCCGATT CGGGGCTCGC CCCCCGGTGG
CTCGTGCTGG AAGTGACGGA GAGCATCATG ATGGACGGCA CCGAAAGCAC CTTGGCCACC
TTCCGCGTGC TGGAGCGAAT GGGAATCCAT ATCGCCATTG ATGATTTCGG TACTGGATAT
TCATCCCTGC ACTATCTGAA AAAGTTTCCG ATCCATGCCC TGAAGATCGA CCGTTCGTTC
ATTCGCGACA TCACAACGAA CCCTGACGAC GAGGCAATTA CCAGCGCGGT GATCACCATG
GCAAAGGGGC TCAATCTGAA AGTGGTTGCC GAAGGTGTTG AAACCGTGGA GCAACTGGAA
GTGCTGCGAG CGCTGCAGTG CACCCACATG CAGGGACACC TCTTCAGCCG CCCCGCGCCG
GCGGAGCAGT TCGCGCCGGT CTTCGGCCGG GCCGCGGGCG CCTACCTCGG TTTCGGAACC
TGGTGCTGA
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| Protein sequence | MANLKRYNDG LFKLDLWIRR LLTIGESNEL YTALCDGVCD IVGAGTAVFT TIDMQAGTLT
YMAASGGWNA MVKGLAVPMK SGNLCASVAA CGTPLRIDQI SSRTDSCELL QVMDMDAAVL
VPVLEEGRVT ACLSAFRVGN PFDQIDEQLL QQYAHTASMV LRTVRLMVDL RHHAAMLEEE
NDERTRAEQK LAETNVFLNS VVDGVAEPMV VVGLDRRVIM TNRAARDFFQ ISDVGSDEAC
HRLIHHRDTP CVREEGMQCP LLDVRTAKRP VIATQEHRDR SGDKRVVEVM TSPLLGSDGV
AIGIIEAFRD ITDRRQAEET IRQMAYYDSL TGLPNRRLFN DRLRQSLALA QRNKRLLSVL
FLDLDRFKLI NDTLGHAVGD KLLMQVAKRL KGVCRRDGDT VARQGGDEFI INLSVISDVK
DALKVAQKII DSLRTPFVID GHELFITTSI GISVFPYDGR TSDALVKNAD FAMYRAKEQG
RNNCQLYTPE MNSKAFERLS LENNLRKGLE REELVLYYQP KVNVEDGQIS CMEALVRWQH
PTMGLVPPAR FIPLAEETGL IVPLGEWVLR TACRQNREWQ KAGYPPMQVA VNISPRQLQQ
GNLVDVVERA LSDSGLAPRW LVLEVTESIM MDGTESTLAT FRVLERMGIH IAIDDFGTGY
SSLHYLKKFP IHALKIDRSF IRDITTNPDD EAITSAVITM AKGLNLKVVA EGVETVEQLE
VLRALQCTHM QGHLFSRPAP AEQFAPVFGR AAGAYLGFGT WC
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