Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU1999 |
Symbol | hfq |
ID | 2686113 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 2191488 |
End bp | 2191712 |
Gene Length | 225 bp |
Protein Length | 74 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637126690 |
Product | hfq protein |
Protein accession | NP_953048 |
Protein GI | 39997097 |
COG category | [R] General function prediction only |
COG ID | [COG1923] Uncharacterized host factor I protein |
TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000129035 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGAAAG CACCATTCAA CATTCAGGAC CAGTACCTCA ACCAGTCGCG TAAGGAGCGG ATCAAGGTCG CCGTGCGGCT CATGTCGGGC GAGAAGCTAG AAGGATACAT CAAGTCGTTC GACAACTTTT CCGTGCTCAT GGAGATCCAG GGTGACATGC TCATCTACAA GCACGCCATT ACCTCCATTA CCTCCGTGGA CGGTCACTTC AGGCTGCACC AGTAG
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Protein sequence | MAKAPFNIQD QYLNQSRKER IKVAVRLMSG EKLEGYIKSF DNFSVLMEIQ GDMLIYKHAI TSITSVDGHF RLHQ
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