Gene GSU1949 details

Gene Information

• Locus tag: GSU1949
• ID: 2685259
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: +
• Start bp: 2136680
• End bp: 2137354
• Gene Length: 675 bp
• Protein Length: 224 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 637126640
• Product: hypothetical protein
• Protein accession: NP_952998
• Protein GI: 39997047
• TIGRFAM ID: [TIGR02595] PEP-CTERM putative exosortase interaction domain

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATACCCC CAGGCAAGTT ATCTCTTATT ATGCTTTTAA CATTGTTACT GGCGGGGCCT 
TCCGCGTGGA GCTACCCCGT GCAATACACG TTGGATGGGT ACGTAATTCA GGGCCCCGGC 
ATTGATGATT CGGCAGGCTT TCTTGACAAT ATGGGGATTA CCGTGGGAAG TCATGTTTCC 
TACACCGTTG TCATAGACCT GGATGCCAGA GGGACGGTGT TAATGAGTGA CGGCACCGTA 
ACCGAGCGGA CAGACCCGTA TGGTAGAGGG ACATTCTATG CTCACTACGC CGGGGGCTCG 
ACCATCACTT CTGACAATTA TCTGAGCTCA TACAATGGAA TATCCGAAAA CAACTATGGC 
GGGAACAAGT GGTTGACCAG CACCTTTTCT GAACGCTGGC TCAGTGTGAG CAGTGGAAAC 
AACTATCTTT CGTTCTACGA CATGCTGCTG CAACCGGATG CCCTCGGGGG GTGGTCGGCA 
AGTTCCGCTC GCGCTTTCGG GGCCGGCACC ATGCGCAACA CCATTTTCGA CGAGTTCGGT 
AACAGTTCCA AATTCTACTT CCTGGCTCAA ATAACGAACG CAGAAACCGT TCCCGTGCCC 
GAACCATCAA CCTTCGCACT TCTTGGGGCC GGACTTGCCG GAATTATCCT TCTCAGAAGA 
AAGAAGTACT TTTAA 

 

Protein sequence

MIPPGKLSLI MLLTLLLAGP SAWSYPVQYT LDGYVIQGPG IDDSAGFLDN MGITVGSHVS 
YTVVIDLDAR GTVLMSDGTV TERTDPYGRG TFYAHYAGGS TITSDNYLSS YNGISENNYG 
GNKWLTSTFS ERWLSVSSGN NYLSFYDMLL QPDALGGWSA SSARAFGAGT MRNTIFDEFG 
NSSKFYFLAQ ITNAETVPVP EPSTFALLGA GLAGIILLRR KKYF