Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU1888 |
Symbol | |
ID | 2688497 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 2066684 |
End bp | 2067424 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637126579 |
Product | ABC transporter, ATP-binding protein |
Protein accession | NP_952937 |
Protein GI | 39996986 |
COG category | [R] General function prediction only |
COG ID | [COG1137] ABC-type (unclassified) transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.986838 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGGCAC GAAGCGTTGA AACGGCCCTC AGAGCACATG GCCTGAAAAA ATCGTTCGGC AAGCGCACGG TGGTAAATGG TGTCGATCTC CTGGTGGCAC CCGGCACCGT CGTTGGCTTG CTGGGCCCCA ACGGTGCGGG CAAGACGACC ACGTTTTACA TGGTTGTGGG GCTCTGCCGT CCCGACGGCG GACAGGTCGT TCTCGGCGAA GAGGACATCA CGGCTCTGCC CATGTACCAG CGGGCGCGAC GGGGCATCAG TTACCTCCCC CAGGAGCCGT CAGTATTCCG TAAGCTCACG GTCGAGGAGA ACCTGCTCGC TGTTCTGGAG ACCATGGATT ACTCGCCGTC AGAACGGAGG GAGAGGGCCG ACGAGCTTCT GGTCGAGTTC AAGATAAGCC ACATCGCGCG GAGCAAGGGC TATTCCCTTT CCGGCGGCGA ACGGAGGCGG GTCGAAATCG CCCGCGCCCT CGCAACTAGT CCGTCGTACA TTCTTCTCGA CGAGCCCTTC GCCGGCATCG ACCCCATTGC GGTCATCGAT ATCCAGGGGA TCATCACGGC CCTCAAGGAG AGCGGCATCG GTATTCTGAT CTCGGATCAC AACGTGCGCG AGACCCTCGG TGTATGCGAC AGCGCCTACA TCATGAATTC CGGAGAAGTC ATAGAGCACG GCGACCCGGT CGCCATTGCC GAAAGCAGGA CAGCCCGGGA GATTTACCTG GGAGAATCAT TCAGACTCTA G
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Protein sequence | MAARSVETAL RAHGLKKSFG KRTVVNGVDL LVAPGTVVGL LGPNGAGKTT TFYMVVGLCR PDGGQVVLGE EDITALPMYQ RARRGISYLP QEPSVFRKLT VEENLLAVLE TMDYSPSERR ERADELLVEF KISHIARSKG YSLSGGERRR VEIARALATS PSYILLDEPF AGIDPIAVID IQGIITALKE SGIGILISDH NVRETLGVCD SAYIMNSGEV IEHGDPVAIA ESRTAREIYL GESFRL
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