Gene GSU1886 details

Gene Information

• Locus tag: GSU1886
• Symbol: yfiA
• ID: 2688507
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: -
• Start bp: 2064476
• End bp: 2065021
• Gene Length: 546 bp
• Protein Length: 181 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 637126577
• Product: ribosomal subunit interface protein
• Protein accession: NP_952935
• Protein GI: 39996984
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG1544] Ribosome-associated protein Y (PSrp-1)
• TIGRFAM ID: [TIGR00741] ribosomal subunit interface protein

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.618476
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGATTA CGACGACATT CAGACACATG GAGCAGAGCG AGGCCCTTAA GAGCTACGCC 
GCTGAAAAGC TGGAGAGGGT AAAGAAATAT ATCGATGAGC CGATTACCGC TCAGGTATTT 
CTCACGGTGG AGAAGATCCG CCACATCGCC GAAGTGACCC TTACCGCCAA GGGAATTACC 
ATCAAGGCTG CGGAAGAAAC CAATGACATG TATGCCGCAC TGGATGCGGT GATCGACAAG 
ATTGAGCGCC AGCTTCGCCG CTACAAAGAG CGGCTCAAAG AGCACAAGCC GTCCGCCGAC 
GATCGGGCCC TGGAAATCCA GAAGAGCGTT GTTACGGCCG AAAGCATCGA GCAACGGACC 
GAACCCGTCG TGATCAGGAG CAAGACCATC TCCATCAAGC CTATGTCCGT GGAAGAGGCT 
GTGATGCAAA TGGATCTTCT GCACAAGGAT TTTCTCGTGT TCACCGACGC ATCCACTGAG 
GCTATCAATG TTGTCTATCG CAGGAAGGAC GGCAACTACG GTCTCATCGA GCCCCAGCGC 
AAGTAG 

 

Protein sequence

MQITTTFRHM EQSEALKSYA AEKLERVKKY IDEPITAQVF LTVEKIRHIA EVTLTAKGIT 
IKAAEETNDM YAALDAVIDK IERQLRRYKE RLKEHKPSAD DRALEIQKSV VTAESIEQRT 
EPVVIRSKTI SIKPMSVEEA VMQMDLLHKD FLVFTDASTE AINVVYRRKD GNYGLIEPQR 
K