| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU1871 |
|---|
| Symbol | |
|---|
| ID | 2686773 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | + |
|---|
| Start bp | 2047929 |
|---|
| End bp | 2050160 |
|---|
| Gene Length | 2232 bp |
|---|
| Protein Length | 743 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637126562 |
|---|
| Product | ribonucleotide-diphosphate reductase subunit alpha |
|---|
| Protein accession | NP_952920 |
|---|
| Protein GI | 39996969 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.289901 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGAAA CGATGACGAA GGCCACCGAT ATCCCCGGAC TCTCGAAAAA TGCAGTGACG
GTCCTCGAGA AGCGCTACCT CAAGCGCGAT ACCGGGGGCA ACGTGCTTGA AACTCCGGTG
GACATGTTTC AACGGGTGGC CCGATCAATC GCCGAAGCCG ACAAGAACTT CGACAAGAAG
GCGGATGTCA AGGCTCTGGC CGCACAATTC TACGAGCTGA TGACCTCCTT CGAGTTCCTC
CCCAACTCGC CGACCCTCAT GAATGCCGGC CGCGAGCTGG GCCAGCTCTC CGCCTGCTTC
GTGCTGCCGG TGGGCGATTC CATGGAAGAC ATCTTCGACG CGGTCAAGTA CACGGCCCTG
ATCCACAAGT CGGGCGGCGG CACCGGATTT TCCTTTTCCC GCCTCCGTCC CGCCCACGAT
GTGGTCCGCT CCACGTCGGG AATCTCCAGT GGGCCTATTT CGTTCATGCG GGTCTTCGAT
GCCGCCACCG AAACCATCAA GCAAGGAGGA ACGAGGCGCG GCGCCAACAT GGGAATCCTG
CGGGTGGATC ACCCGGACAT CATGGATTTC ATCATGTGCA AGGACGATCA AAAGCACCTG
AACAACTTCA ATATCTCCGT GGGGCTCACC GAAGCCTTCA TGGAAGCAGT GGAGCGGGAT
GCCGACTATG ACCTCATCAA CCCCCGGGAC GGCAAACCCT GCGGCACCCT GAACGCCCGC
AAGGTGTTCA GCCGGATCGT GAAGCAGGCA TGGAAGAACG GCGAGCCGGG CATCATCTTC
CTGGATCGCC TCAACAAGGA CAACCCGACC CCCCACGTGG GCGTCATCGA GTCCACCAAC
CCCTGCGGCG AACAGCCCCT GCTCCCCTAT GAATCATGCA ACCTGGGCTC CATCAACCTG
GGCAAGATGG TGAAGAACGG CGACGTTAAC TGGGACCGTC TGCGGGACGT GGTGCGGCTG
GCGGTACACT TCCTGGATAA CGTGATCGAG GTGAACAACT ACCCTCTCCC ACAGATCAGC
GAGATGACCC GCGCTAACCG CAAGATAGGC CTCGGCGTCA TGGGCTGGGC CGACATGCTC
ATCCTGCTGG GCATTCCCTA CAATTCACCG CAGGCCATCA GCCTGGGCGA AAAGGTGATG
CGCTTCATCA ACGACGAAGG GCATGTCTAT TCCCGTGAAC TGGCAGCCGT GCGGGGATCG
TTCCCGAACT TCGCCGGCTC CATCTACGAC CGGGCCAGCG AAGGCCCTAT CCGCAACGCC
ACTGTGACCA CCATTGCGCC CACGGGCACC ATATCCATCA TCGCCAATGC CTCCAGCGGC
GTGGAACCGC TTTTTGCCGT CTCTTTCATC CGCCAAGTGC TCGACAAGAA CATTCTGGTG
GAAGTAAACC CGATTTTCGA GGAAGTTGCC CGCCAGCGGG GGTTTTACTC CGAGGAACTG
ATGCAGAAGA TCGCACGGCA CGGCACCATC CACGATCTGC CCGAGATCCC GGAGGATATC
CGGAAGATAT TTGTCACCGC CCACGACATC ACACCGGAAG ACCACATCGA GATGCAGGCG
GCTTTCCAGA AGTACACCGA CAACGCCGTG TCCAAGACGG TTAACTTCCC CAATAGCGCG
GCCATCGAGG ATGTGGAGAA AGTCTACCGG CTGGCCTACA AATCGGGCTG CAAGGGTGTA
ACCATCTACC GCGACGGCTC CCGCGACGAA CAGGTCCTCT CCACCGGTGT CAAAGAGGAC
AAGGAGAAGG TGGTTCAAAC CGAGGAGAAG CGGGCCGTGA AGCGCGATCG TCCCAAGGCG
CTCAAGGGGT GGACCTACCA GATGCAGACG GGGTGCGGCC CCCTGTATGT GACCATCAAC
GAGGACAAGG CCGGCCTCTT CGAGTTGTTC ACAACCATGG GCAAGGCTGG CGGATGCGCC
TCTTCCCAGT GCGAGGCCAT CGGCCGGATG GTTTCACTGG CTTGGCGCAG CGGCGTTCAG
GCCCGCCAGG TGATCAAGCA GCTCCTCGGC ATCTCCTGCC ACCTCCCCGC CGGTTTTGGC
GACAACAAGG TGCTGTCCTG CGCCGATGCT GTTGCCAAGG CGATCCAGGC CCACATGCAG
GCAGCCGGTT ACGATGTCAG CCTGGAAGCC CAGGCCCCCG AACGCGGCGC CTGCCCCGAG
TGCGGCGGCA TTGTTGAGCA TGAGGGCGGC TGCGCGGTCT GCCGGGTCTG TGGCTATTCG
GAGTGCGCGT AG
|
|---|
| Protein sequence | MAETMTKATD IPGLSKNAVT VLEKRYLKRD TGGNVLETPV DMFQRVARSI AEADKNFDKK
ADVKALAAQF YELMTSFEFL PNSPTLMNAG RELGQLSACF VLPVGDSMED IFDAVKYTAL
IHKSGGGTGF SFSRLRPAHD VVRSTSGISS GPISFMRVFD AATETIKQGG TRRGANMGIL
RVDHPDIMDF IMCKDDQKHL NNFNISVGLT EAFMEAVERD ADYDLINPRD GKPCGTLNAR
KVFSRIVKQA WKNGEPGIIF LDRLNKDNPT PHVGVIESTN PCGEQPLLPY ESCNLGSINL
GKMVKNGDVN WDRLRDVVRL AVHFLDNVIE VNNYPLPQIS EMTRANRKIG LGVMGWADML
ILLGIPYNSP QAISLGEKVM RFINDEGHVY SRELAAVRGS FPNFAGSIYD RASEGPIRNA
TVTTIAPTGT ISIIANASSG VEPLFAVSFI RQVLDKNILV EVNPIFEEVA RQRGFYSEEL
MQKIARHGTI HDLPEIPEDI RKIFVTAHDI TPEDHIEMQA AFQKYTDNAV SKTVNFPNSA
AIEDVEKVYR LAYKSGCKGV TIYRDGSRDE QVLSTGVKED KEKVVQTEEK RAVKRDRPKA
LKGWTYQMQT GCGPLYVTIN EDKAGLFELF TTMGKAGGCA SSQCEAIGRM VSLAWRSGVQ
ARQVIKQLLG ISCHLPAGFG DNKVLSCADA VAKAIQAHMQ AAGYDVSLEA QAPERGACPE
CGGIVEHEGG CAVCRVCGYS ECA
|
|---|
| |