Gene GSU1809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGSU1809 
SymbolftsH-2 
ID2688702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sulfurreducens PCA 
KingdomBacteria 
Replicon accessionNC_002939 
Strand
Start bp1973772 
End bp1975616 
Gene Length1845 bp 
Protein Length614 aa 
Translation table11 
GC content58% 
IMG OID637126496 
Productcell division protein FtsH 
Protein accessionNP_952859 
Protein GI39996908 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0465] ATP-dependent Zn proteases 
TIGRFAM ID[TIGR01241] ATP-dependent metalloprotease FtsH 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0346889 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGGTAC CCTTGAACCA GTTCTACAAG AACCTTGCGC TCTGGCTCGT CATAAGCCTT 
ATGATGATCC TCCTCTTCAA CCTCTTCAAC AAGCCGCGCA CCACCCAGGA ACGGCTCGGC
TACAGCGACT TCATTGCTGC GGTTGATGCG GGGAAGGTCA GCACGGTTAC GGTCCAGGGG
AACGAGATCA TCGGCAAGTA TTCCGACGGC AAGGAATTCC GCAGCTACAA GCCGACAGAT
GCCATGCTCT CCGAAAAGCT TCTGGAGAAG AAGATCAATG TCTCTGCCAA GCCCGAGGAA
GAGAAGGTCT CGTGGTTCTC CATCTTCATC TCCTGGTTCC CGCTCCTTTT TCTGGTGGGG
GTCTGGATTT TCTTCATGCG CCAGATGCAG GGAGGGGGTG GCAAGGCCAT GGCATTCGGC
AAGAGCCGCG CGAAGCTTCT GACAGAAGCC CAGGGGCGCG TGACCTTCGA AGACGTGGCC
GGTGTAGACG AAGCAAAGGA AGAACTGGAA GAAATCATCC AGTTTCTGAA GGATCCCAAG
AAATTCACCA AGCTAGGAGG CCGTATCCCC AAAGGTGTTC TGCTCGTGGG CCCTCCCGGC
ACGGGCAAGA CGCTCCTGGC ACGGGCCGTA GCCGGAGAGG CGGGAGTTCC TTTCTTCTCC
ATTTCGGGAT CCGACTTTGT CGAAATGTTT GTTGGGGTCG GCGCGAGCCG GGTCCGCGAT
CTTTTCGTGC AGGGAAAGAA GAATGCGCCC TGCATTATCT TCATCGATGA GATCGATGCG
GTTGGACGCC ATCGGGGTGC GGGACTCGGC GGCGGCCATG ACGAGCGGGA ACAGACACTG
AACCAGCTGC TGGTTGAGAT GGACGGCTTC GAATCCAACG AAGGGGTCAT TCTTATCGCG
GCCACAAACC GGCCCGATGT CCTCGATCCG GCACTCCTAC GGCCGGGACG GTTCGACCGC
CAGGTGGTCG TTCCCCAGCC CGACGTGAAG GGGCGGGAGA TGATTCTGAA GGTCCACACC
AAAAAGACCC CGCTTGCTTC CGATGTGGAC CTGGGAGTAA TCGCCCGCGG CACGCCCGGC
TTCTCGGGAG CGGACCTGTC CAACGTGGTG AACGAGGCTG CTCTGCTGGC GGCGCGTAAG
GACAAGAGCT TTGTCGAAAT GAAGGACTTT GACGACGCCA AGGACAAAGT CCTCATGGGT
GTCGAGCGTC GCAGTATGGT GATTTCGGAG GAAGAGAAGA AAAATACCGC CTATCACGAA
GCCGGCCATA CCCTTGTTGC CAAACTGATC CCGGGCACCG ATCCGGTGCA CAAGGTTTCC
ATTATTCCGC GGGGACGGGC GCTTGGCGTT ACCATGCAAC TGCCTATCGA GGACAAGCAC
AGCTATAACA AGGAGTCGCT CCTGAACCGG ATCGCGGTGC TCATGGGAGG CCGGGCTGCC
GAAGAGATCA TCTTCAATGA GCTTACCACG GGCGCCGGTA ACGACATTGA ACGTGCAACG
GAGATCGCAC GCAAGATGGT GTGCGAATGG GGTATGAGCG AAAAGATGGG GCCGGTCACC
TTCGGTAAGA AGGAGGAGTC GATCTTCCTT GGCCGTGACA TGTCCATGCA CAAGAACTAC
AGTGAAGCGA CGGCGGTGGA AATCGACGAG GAGATTCGTA AAATCATCGA CGGCAGCTAC
TCGCGGGTCA AGCAGCTCCT GAATGAGAAT CTGAGCGTGC TCCACTGTCT GGCAACACAG
CTTATCGAGA AAGAGAACCT GACCGGCGAC GAAGTTGACC GGATCATCAA GGATGACTGC
GCGGCCAGCC GCGCTGCAGT CGAAGAGGCC CCCGTGGCTC CATGA
 
Protein sequence
MGVPLNQFYK NLALWLVISL MMILLFNLFN KPRTTQERLG YSDFIAAVDA GKVSTVTVQG 
NEIIGKYSDG KEFRSYKPTD AMLSEKLLEK KINVSAKPEE EKVSWFSIFI SWFPLLFLVG
VWIFFMRQMQ GGGGKAMAFG KSRAKLLTEA QGRVTFEDVA GVDEAKEELE EIIQFLKDPK
KFTKLGGRIP KGVLLVGPPG TGKTLLARAV AGEAGVPFFS ISGSDFVEMF VGVGASRVRD
LFVQGKKNAP CIIFIDEIDA VGRHRGAGLG GGHDEREQTL NQLLVEMDGF ESNEGVILIA
ATNRPDVLDP ALLRPGRFDR QVVVPQPDVK GREMILKVHT KKTPLASDVD LGVIARGTPG
FSGADLSNVV NEAALLAARK DKSFVEMKDF DDAKDKVLMG VERRSMVISE EEKKNTAYHE
AGHTLVAKLI PGTDPVHKVS IIPRGRALGV TMQLPIEDKH SYNKESLLNR IAVLMGGRAA
EEIIFNELTT GAGNDIERAT EIARKMVCEW GMSEKMGPVT FGKKEESIFL GRDMSMHKNY
SEATAVEIDE EIRKIIDGSY SRVKQLLNEN LSVLHCLATQ LIEKENLTGD EVDRIIKDDC
AASRAAVEEA PVAP