| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU1755 |
|---|
| Symbol | pyrD |
|---|
| ID | 2687066 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | - |
|---|
| Start bp | 1918043 |
|---|
| End bp | 1918960 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637126435 |
|---|
| Product | dihydroorotate dehydrogenase 1B |
|---|
| Protein accession | NP_952805 |
|---|
| Protein GI | 39996854 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0167] Dihydroorotate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01037] dihydroorotate dehydrogenase (subfamily 1) family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0665746 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAAAC CTGACCTTTC CGTTGAGATT GCTGGCATCA CGCTGAGAAA CCCGGTCATG
ACCGCCTCGG GCACCTTCGG CTACGGCGAG GAGTTCTCGG AGTACGTGAA CCTGGAGGCG
ATCGGCGCCA TCATCACCAA AGGGCTGTCC TTGAAGCCCA AGGCCGGCAA TCCGACCCCG
CGTATCGTCG AAACCACCGG TGGAATGCTG AACGCCATCG GTCTGCAAAA TGTGGGCATT
GATGCCTTTG TCGAGAAAAA GGTACCGTTT CTCCGCACGG TTGCCACGCC GGTGATCGTT
AATTTTTTCG GAAACACCCT CGAAGAATAT GCCGAACTCG CCGAGCGCCT GGACCTGATA
CCCGAAGTGG CTGCCGTGGA GATCAATATT TCCTGCCCGA ACGTCAAACA TGGCGGGATC
GTTTTCGGTA CAGACCCCAA GGCCGCCTAT TCGGTGGTAA AGGCAGTGCG GGAGGCCACC
ATCAAGCCGG TGATCGTCAA GCTGTCGCCC AATGTGACCG ATATTGTGGA GATGGCCTGG
GCCTGTGCCG ATGCGGAAGC CGACGCCCTT TCCCTCATTA ATACCCTCAC CGGCATGGCC
ATTGATCTGG ACAAGCGCCG TCCAATCCTG GCCAACGTGA CCGGCGGCCT CTCCGGACCG
GCGGTGAAGC CGATCGCGCT ACGCATGGTC TGGCAGGTTG CCAGGGCGGT GAAGATTCCG
GTTATCGGCA TAGGGGGCAT CATGACCGGC ATCGATGCTC TGGAGTTCAT GCTTGCCGGC
GCAACGGCCG TGCAGGTTGG CACCGCCAAC TTCCTGGATC CGGGCGCCGC GGGCCGGATT
GCTGCGGAAA TGGAGCGATA TCTGGCGGAT AACGGTATCG CCGATGTTAA GGAGATGATC
GGCGCCCTGG AGGTCTAG
|
|---|
| Protein sequence | MQKPDLSVEI AGITLRNPVM TASGTFGYGE EFSEYVNLEA IGAIITKGLS LKPKAGNPTP
RIVETTGGML NAIGLQNVGI DAFVEKKVPF LRTVATPVIV NFFGNTLEEY AELAERLDLI
PEVAAVEINI SCPNVKHGGI VFGTDPKAAY SVVKAVREAT IKPVIVKLSP NVTDIVEMAW
ACADAEADAL SLINTLTGMA IDLDKRRPIL ANVTGGLSGP AVKPIALRMV WQVARAVKIP
VIGIGGIMTG IDALEFMLAG ATAVQVGTAN FLDPGAAGRI AAEMERYLAD NGIADVKEMI
GALEV
|
|---|
| |