| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU1738 |
|---|
| Symbol | |
|---|
| ID | 2685278 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | - |
|---|
| Start bp | 1903118 |
|---|
| End bp | 1903696 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637126418 |
|---|
| Product | indolepyruvate oxidoreductase subunit beta |
|---|
| Protein accession | NP_952788 |
|---|
| Protein GI | 39996837 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit |
|---|
| TIGRFAM ID | [TIGR03334] indolepyruvate ferredoxin oxidoreductase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0496035 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACA CCATCACCAA CATCCTCCTG GTGGGCGTGG GCGGGCAGGG AATACTGCTC
GCGTCTGAAA TCCTCTCCGA GGCATTCATG CTGGCCGGGT TCGACGTGAA AAAGAGCGAA
ATCCACGGCA TGTCCCAGCG GGGAGGGAGT GTTGTCTCCC ATGTCCGCTA CGGCAAGGAA
GTCCATTCAC CCATCGTGCC CGAAGGGGAG GGGGACATCC TCTTCGGCTT CGAGCTGATG
GAAACCTATC GCTACCTGCC CCTGCTCAGG AAGGGGGGGA CGGTGGTGGC CAACGATCTG
CGCATTTCGC CACCGTCGGT TCTCCTGGGG CAGGCGAGCT ACCCCGATGA TCTGCCGGAC
AGGATTCGGG CGCTGTTCCC CGATTTCCTC CTGGTGGACG GACAGCATCT CGCCGCCGAG
GCCGGCAATG TCAGGGCCGC CAATACGGTG CTCCTGGGCG CCGTGGCCAA GCAGCTCGAT
ATCCCTGACG AGTGCTGGCA CAAGGCCCTG GAGCGGATGG TTCCCCCAAA GGCGCTCGAT
GTGAACCGTA AGGCTTTCCA GTTGGGCAGA GCCCTGTAA
|
|---|
| Protein sequence | MSDTITNILL VGVGGQGILL ASEILSEAFM LAGFDVKKSE IHGMSQRGGS VVSHVRYGKE
VHSPIVPEGE GDILFGFELM ETYRYLPLLR KGGTVVANDL RISPPSVLLG QASYPDDLPD
RIRALFPDFL LVDGQHLAAE AGNVRAANTV LLGAVAKQLD IPDECWHKAL ERMVPPKALD
VNRKAFQLGR AL
|
|---|
| |