Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU1725 |
Symbol | |
ID | 2685299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 1889279 |
End bp | 1891720 |
Gene Length | 2442 bp |
Protein Length | 813 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637126405 |
Product | nuclease SbcCD, C subunit, putative |
Protein accession | NP_952775 |
Protein GI | 39996824 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0419] ATPase involved in DNA repair |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.536729 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGATAC TCTCCATCCA TCTGAAGAAC ATAAAATCCC ACCGCGACAC GGAGCTGACC TTCTCCGCCG GTATCAATGT CCTTTCCGGC CCCAACGGCG TCGGCAAGAG CACGGTGTTC GAGGCGATCG GCTACGCTCT GTTCGGGGTG GACGCCCGGG ACTTCGTCTC CAACGTGGAC CGGTTTCTCT CCATCGGCAC CAAGAAGGGA GAGATCGCCG TCGCCTTCTG CACGGATGCC GGAGAAACCT GGCGGGTGAC CCGAACCGTC GGCACCCCGG CCAAGTGGCT CCTGGCCAGG GAGCAGGGTG GGGCCTTCGA GGTGGAGGAG CACGCCCGAA TCGAAGAAAC CGAGGCCCGC ATCGCCGAAC TCCTCGGTCT CGACAACGGC CGTCCCCTGG CGGAGCAGTT CAAACTGGTG ATCGGCCCCT TCCAGAACGA ATTCCTCGGC CCATTCGTCA TCAAGCAGCC CACCAAACGC CAGGAGGCCT TCGACGAGAT CCTCGGCATC GATGCCTGGC GCAAGACCTA CAAGAGCACC AGCTCGCTCC TCTCCGCTGT GCAGGAAAAA ATCAAGATTA TCGCCGTGGA GATTGAGGCG AAAGAAGCCC AGGTTGCGGT CCTGCCCGAG CGTGAGGATG AACTGGCAAA GATAAAAACC GATGCCGAGG CGCTCCGGAA AGTCCTTTCA TCACAAGCGG ATGCCCTGCG GGACGTGGAG AAGCAGCTGG TCGAGCTCGA TGACCAGGAA AAGGGAATAG CCGCGCTCCA GGCCGAGATC CAGATCCTCG TTAACCGCAT CACTGATGGC GAAGGCAAGA TCAAGGATCA GGGGCAAAGG GTAGGGGAGG CGGAGAAGGC CGGCGGGGTT CTGGAGCAGA CGCGGGCGGG CAAGGAGGCT TTCGAACGGG CCGAATCGCG GCTGGCGGAG TTGGTGAGTA AAGACAAACA GCGTCGAGAG GTCGAGAAGG ACGTTACCCG CCTTGAAAAT GAGACCCAGC GCCTGACGCA GGCAGTCGAG CATGAACAGA AGGAGATTGA AGGGGAGGGG CGCCGCCTCA GAGAGGAAGA GGACGCCCTT GCCAAAGCCC GGAACGAACT AGAGCCGGAC CGGAAGGTGG TGGACACGGC TGGCCGGCTG CCAGGACTTC GCGACGAGAT CAATCGCGTT CGCTCGGAAA AGGGACTCCT GGAAGGGCGC CGCATCGGAC TTCTGGAGGG GCAGGAGAAG CTTGGCGAAG GGACATGCCC CTTTTTCAAG GAGCCCTGCC GGAACGTGGC CGGAACCACG CCGAAAGACG TGTTCACCAC GAGGATTGCC GAGCTTGACC GGAAGATGCA GGCACTCACC GAGGCCTTGG GCAAACTATC CGTAGAGGTG GCTGACGCCG AGGCGGCCGA GAAACAGCTT GCCGCCCTGA CAGTCCGGAG CCAGGAACTG CACAAACAGA CGATGGGCTT GGTTGAACGC CGCGCCAGAA ATGAAAAACG CGTCGCTACG TTGCAGACAT TGTCAACGCA ACAGATCGAA GCGGCCACCC GGGCTAAAGC GCGCAGGGAC GATCTTCAGG TCTTTGCCGG CCTTGACCAT GAGATTGAAC GTGCAACCGC AGAGCGGGGC CGGTTCCAGG CCGACCGCGA TGCCTACCAT GCCCACGAAA AGGATGCCCT GGATCTGGAT AACCGGCGCC AGACCCTGGA GAAGATGCTC CGGCTCCTGG ATGAGTTGCA GAAGCAACTC ATCGGGAAGA AAGAGGAACT TATCCGGCTT CAGGAAACCT ATAAACCGGG CCAGCACAAG GAAGCCCGTG ACCAGAAAGA CCGGCTGGTA GCGCAAGTCG CCTCGCTAGG CCAGCAGATC GAAAATCTGG AGAAGGACCG GAAGCGCCTT GAGGATGAAA TCGGCAAACT GAAGCTGCTT AAAGACGAGA TTGGGCGGAA GCAGGCCGAG AGGAACTCCT TCGAACAGAA GGAGAAACTC GTCAAATTCC TCCGCAACCA GGTCTTCAAG AACGTCTCAG CCCAACTCTC GGAGCGGTTC CGGGAGGAAA TCAGCCTCCG CGCCGACCGG ATCTACCGCA CCATTGCCGA GGCCGATGAG GAACTGGTCT GGTCCGAGAA CTACCAGATC GTGCTGCGAG ACATGACGGA CGGCGTTGTT CGCGAACGGA GCGACGACCA GCTCTCCGGC GGCCAGACCA TGAGCGCCGT AGTGGCCCTG CGGCTGGCAC TGCTTCAGAC CATCGGCGCC CGGATCGCAT TTTTTGACGA ACCGACATCC AACCTTGATG CCTCGCGGCG GGAAAACCTG GCCACCGCAT TCCGCGCCAT CGATGTAGGC CGGGAAGAGG TCACCGAACA CTGGTACGAC CAACTGTTCC TCATCAGCCA TGATGTAGCC TTCACCGAGA TTACGGATCA GATGATTCAA CTGGGCGAGT GA
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Protein sequence | MRILSIHLKN IKSHRDTELT FSAGINVLSG PNGVGKSTVF EAIGYALFGV DARDFVSNVD RFLSIGTKKG EIAVAFCTDA GETWRVTRTV GTPAKWLLAR EQGGAFEVEE HARIEETEAR IAELLGLDNG RPLAEQFKLV IGPFQNEFLG PFVIKQPTKR QEAFDEILGI DAWRKTYKST SSLLSAVQEK IKIIAVEIEA KEAQVAVLPE REDELAKIKT DAEALRKVLS SQADALRDVE KQLVELDDQE KGIAALQAEI QILVNRITDG EGKIKDQGQR VGEAEKAGGV LEQTRAGKEA FERAESRLAE LVSKDKQRRE VEKDVTRLEN ETQRLTQAVE HEQKEIEGEG RRLREEEDAL AKARNELEPD RKVVDTAGRL PGLRDEINRV RSEKGLLEGR RIGLLEGQEK LGEGTCPFFK EPCRNVAGTT PKDVFTTRIA ELDRKMQALT EALGKLSVEV ADAEAAEKQL AALTVRSQEL HKQTMGLVER RARNEKRVAT LQTLSTQQIE AATRAKARRD DLQVFAGLDH EIERATAERG RFQADRDAYH AHEKDALDLD NRRQTLEKML RLLDELQKQL IGKKEELIRL QETYKPGQHK EARDQKDRLV AQVASLGQQI ENLEKDRKRL EDEIGKLKLL KDEIGRKQAE RNSFEQKEKL VKFLRNQVFK NVSAQLSERF REEISLRADR IYRTIAEADE ELVWSENYQI VLRDMTDGVV RERSDDQLSG GQTMSAVVAL RLALLQTIGA RIAFFDEPTS NLDASRRENL ATAFRAIDVG REEVTEHWYD QLFLISHDVA FTEITDQMIQ LGE
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