Gene GSU1709 details

Gene Information

• Locus tag: GSU1709
• Symbol: smpB
• ID: 2685400
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: +
• Start bp: 1873660
• End bp: 1874121
• Gene Length: 462 bp
• Protein Length: 153 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 637126390
• Product: SsrA-binding protein
• Protein accession: NP_952760
• Protein GI: 39996809
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.0149731
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGAGAAA AGCTGATCTG CAACAACAAG AAAGCGTTTC ACGATTTCTT CATAGAAGAG 
CGTTTTGAAG CGGGAATGGT GCTGAAGGGG ACCGAGGTGA AATCCCTTCG CGACGGCAAG 
GCAAACCTCA ATGATTCCTT TGCCTTGATC CGTAACGGTG AAATCTTTCT GCACAATCTC 
CACATCAATC CCTACGCGTT CGGCAACCGG GAGAACCACG ATCCTGACAG GCTGCGCAAG 
CTCCTGATGC ATAAGAAAGA GATCGAAAAG CTCTTCGGCA AGATCCGCGA AAAGGGATAC 
TCGGTTGTGC CGTTGCGCCT CTACTTCAAG AATGGCCTCG CCAAGGTCGA GTTGGGACTT 
GCCAAGGGCA AGAAGCTCTA CGACAAGCGG GAAGACATGA AGAAGAAAGA CCAGTCGAGG 
GAGATGGCCC AGGCCCTCAG AGAAAAGAGC AAGAGTCACT GA 

 

Protein sequence

MGEKLICNNK KAFHDFFIEE RFEAGMVLKG TEVKSLRDGK ANLNDSFALI RNGEIFLHNL 
HINPYAFGNR ENHDPDRLRK LLMHKKEIEK LFGKIREKGY SVVPLRLYFK NGLAKVELGL 
AKGKKLYDKR EDMKKKDQSR EMAQALREKS KSH