Gene GSU1658 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGSU1658 
Symbol 
ID2685291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sulfurreducens PCA 
KingdomBacteria 
Replicon accessionNC_002939 
Strand
Start bp1819776 
End bp1821152 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content55% 
IMG OID637126339 
Productresponse regulator/GGDEF domain-containing protein 
Protein accessionNP_952709 
Protein GI39996758 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.939598 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACGGA TTCTCGTTGT CGAAGATGAC CGTTTTTTTC GTCAGATGTA TGTTGATCTC 
CTGAAAGAGG AGGGATACGA GGTCGATACC GTGGCATCGG GCACCGAGGG GTTGAAGCGG
CTTGAGAAGC AAGAATACCA CCTCGTCATT ACCGACCTGG TCATGCCCGG AATGAGCGGT
ATCGAGGTGT TGTCCCGCGT CAAGCAGAAA GCTCCGAACG TCGATGTCAT CCTCGTCACC
GGTCACGCCA ACCTCGAATC GGCCGTCTAT GCCCTCAAGA ATGGTGCCCG CGATTATATT
CTCAAACCGT TCAACCATGA TGAATTCAAG CACACCGTGG CACTTTGCTT TGAGCAGCGG
AGGCTTATCA ACGAAAACTA CGAGCTCAAG GAGCTGCTGA ATCTTTTTCA AGTTGGGCAG
AACATAGCCA ACTGTATCGA CTTGGAACGG CTCTCTGCGG TTGTGGTCGA TGCTTTCTGC
AAGGAGGTCG GAGTTTCACG CGCTATCGGC CTCTTTCCCG AAAAGAGCGA ACCCCACGCC
CTCAAGGAGC TGAGGGGGCT TGAGCCTGAA GTTGCAGCCG CTCTTGCCGA AAAAGCTCTT
ACCCTTTGCA GTGACGCCGC GGAGACGGCA GGGGGCTTTC GACGGCTCGA CGGTTCCCAT
TTTTCCGATG GTCTCCTGCG AACTGCGGGG ATTAATGGCG CCCTTGTGGT TAGCATCCGC
CAGCGTACGC TCCTGCAGGG AGTGCTTCTG CTGGTCAATG ACCAGGGCAA GCCGTTCCCT
GCCGTGTTCA AACATAAAAG CATCCAGTTT TTGCTGGAGC AGGCATCGCT TGCCTTCGAC
AACGCCCTGC GTTACTCCAG CGCCCGCGAC ATGCTCTATG TTGACGAACT CACGGGACTC
TTCAACTACC GTTACCTTGA CATCTCGCTG GACCGGGAGT TGAAGCGGGC TGACCGATTC
GGCTCGGTAG TTTCCATGAT CTTCATCGAC ATGGACCACT TCAAGGGAGT CAACGACACC
CACGGCCATC TTTTTGGGAG CCAGGTCCTC CATGAAGTAG GTCAATTGCT CAAGAAGTCG
GTCCGTGAGG TCGATGTAAT CATTCGCTAC GGTGGCGACG AGTTCACCAT AATTCTGGTG
GAAACCGGTG AAAAGGGCGC TGCAACCGTG GCTGAAAGGA TTCGTCGCTC CATCGAGGAC
CACCACTTTC TGGCCTCTGA AGGGCTCGAT GTCCGGCTCA CCGCAAGTCT CGGCTACGCC
TGTTATCCCC TTGACACCCA GTCCAAAATG GAACTTCTCG AACTGGCGGA CAAAGCCATG
TATAGGGGCA AGGAAGAGGG CAAAAACCGT GTATTCCGGG CAACGGCAAT CCGTTGA
 
Protein sequence
MERILVVEDD RFFRQMYVDL LKEEGYEVDT VASGTEGLKR LEKQEYHLVI TDLVMPGMSG 
IEVLSRVKQK APNVDVILVT GHANLESAVY ALKNGARDYI LKPFNHDEFK HTVALCFEQR
RLINENYELK ELLNLFQVGQ NIANCIDLER LSAVVVDAFC KEVGVSRAIG LFPEKSEPHA
LKELRGLEPE VAAALAEKAL TLCSDAAETA GGFRRLDGSH FSDGLLRTAG INGALVVSIR
QRTLLQGVLL LVNDQGKPFP AVFKHKSIQF LLEQASLAFD NALRYSSARD MLYVDELTGL
FNYRYLDISL DRELKRADRF GSVVSMIFID MDHFKGVNDT HGHLFGSQVL HEVGQLLKKS
VREVDVIIRY GGDEFTIILV ETGEKGAATV AERIRRSIED HHFLASEGLD VRLTASLGYA
CYPLDTQSKM ELLELADKAM YRGKEEGKNR VFRATAIR