Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU1658 |
Symbol | |
ID | 2685291 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 1819776 |
End bp | 1821152 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637126339 |
Product | response regulator/GGDEF domain-containing protein |
Protein accession | NP_952709 |
Protein GI | 39996758 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.939598 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACGGA TTCTCGTTGT CGAAGATGAC CGTTTTTTTC GTCAGATGTA TGTTGATCTC CTGAAAGAGG AGGGATACGA GGTCGATACC GTGGCATCGG GCACCGAGGG GTTGAAGCGG CTTGAGAAGC AAGAATACCA CCTCGTCATT ACCGACCTGG TCATGCCCGG AATGAGCGGT ATCGAGGTGT TGTCCCGCGT CAAGCAGAAA GCTCCGAACG TCGATGTCAT CCTCGTCACC GGTCACGCCA ACCTCGAATC GGCCGTCTAT GCCCTCAAGA ATGGTGCCCG CGATTATATT CTCAAACCGT TCAACCATGA TGAATTCAAG CACACCGTGG CACTTTGCTT TGAGCAGCGG AGGCTTATCA ACGAAAACTA CGAGCTCAAG GAGCTGCTGA ATCTTTTTCA AGTTGGGCAG AACATAGCCA ACTGTATCGA CTTGGAACGG CTCTCTGCGG TTGTGGTCGA TGCTTTCTGC AAGGAGGTCG GAGTTTCACG CGCTATCGGC CTCTTTCCCG AAAAGAGCGA ACCCCACGCC CTCAAGGAGC TGAGGGGGCT TGAGCCTGAA GTTGCAGCCG CTCTTGCCGA AAAAGCTCTT ACCCTTTGCA GTGACGCCGC GGAGACGGCA GGGGGCTTTC GACGGCTCGA CGGTTCCCAT TTTTCCGATG GTCTCCTGCG AACTGCGGGG ATTAATGGCG CCCTTGTGGT TAGCATCCGC CAGCGTACGC TCCTGCAGGG AGTGCTTCTG CTGGTCAATG ACCAGGGCAA GCCGTTCCCT GCCGTGTTCA AACATAAAAG CATCCAGTTT TTGCTGGAGC AGGCATCGCT TGCCTTCGAC AACGCCCTGC GTTACTCCAG CGCCCGCGAC ATGCTCTATG TTGACGAACT CACGGGACTC TTCAACTACC GTTACCTTGA CATCTCGCTG GACCGGGAGT TGAAGCGGGC TGACCGATTC GGCTCGGTAG TTTCCATGAT CTTCATCGAC ATGGACCACT TCAAGGGAGT CAACGACACC CACGGCCATC TTTTTGGGAG CCAGGTCCTC CATGAAGTAG GTCAATTGCT CAAGAAGTCG GTCCGTGAGG TCGATGTAAT CATTCGCTAC GGTGGCGACG AGTTCACCAT AATTCTGGTG GAAACCGGTG AAAAGGGCGC TGCAACCGTG GCTGAAAGGA TTCGTCGCTC CATCGAGGAC CACCACTTTC TGGCCTCTGA AGGGCTCGAT GTCCGGCTCA CCGCAAGTCT CGGCTACGCC TGTTATCCCC TTGACACCCA GTCCAAAATG GAACTTCTCG AACTGGCGGA CAAAGCCATG TATAGGGGCA AGGAAGAGGG CAAAAACCGT GTATTCCGGG CAACGGCAAT CCGTTGA
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Protein sequence | MERILVVEDD RFFRQMYVDL LKEEGYEVDT VASGTEGLKR LEKQEYHLVI TDLVMPGMSG IEVLSRVKQK APNVDVILVT GHANLESAVY ALKNGARDYI LKPFNHDEFK HTVALCFEQR RLINENYELK ELLNLFQVGQ NIANCIDLER LSAVVVDAFC KEVGVSRAIG LFPEKSEPHA LKELRGLEPE VAAALAEKAL TLCSDAAETA GGFRRLDGSH FSDGLLRTAG INGALVVSIR QRTLLQGVLL LVNDQGKPFP AVFKHKSIQF LLEQASLAFD NALRYSSARD MLYVDELTGL FNYRYLDISL DRELKRADRF GSVVSMIFID MDHFKGVNDT HGHLFGSQVL HEVGQLLKKS VREVDVIIRY GGDEFTIILV ETGEKGAATV AERIRRSIED HHFLASEGLD VRLTASLGYA CYPLDTQSKM ELLELADKAM YRGKEEGKNR VFRATAIR
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