Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU1656 |
Symbol | |
ID | 2687084 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 1815737 |
End bp | 1816999 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637126337 |
Product | sensory box/response regulator |
Protein accession | NP_952707 |
Protein GI | 39996756 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain [COG2202] FOG: PAS/PAC domain [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCCCCCTC CGCTTCGTGT ACTCATACTT GAAGACTCGG AAGATGATTA CTTCCTCCTC GTGAGAGCTC TCAAGCGCGA GTTCGATATC GTCCCCGAGC GGGTTGATTC GGAAGAGTCG CTCCGCGCCA ATCTCTGCGA AAAGAGATGG GATATCGTAT TGTCGGATTA TTTCATGCCA CAATTCGATG CCTTGGCTGC CTTAACCCTC ATCCAGAGCA TGAACCTGGA TATCCCCTTC ATCATCGTTT CGGGCAAAAT CGGGGAATTT GAAGCGGTTA AAGCGATGAA AGCCGGCGCT CATGACTATA TCATGAAGGG CGATTATACC CGCCTGATCC CCGCTATCCG CCGAGAACTC CGCGAAGCCG TGATCCGGCA GGAACAACGT CGGACCGACC ACGAACTCCG CGAACAACTC CACTTCCGAC AGGCGCTGAT TGACGCCATT CCCGCCCCTA TCTACTTCAT GGATACCACG GGAATTTTCC TTGGCTGCAA CAAGGCGTTC GAGGCATTTT CGGGCCACAC TCAGGATGAA ATCGTCGGGA AGACAATCTA TGACCTGATG CCCCCCTCGC TCGCAAAGCA CACTGACAGT GCGGACAGGG AGCTGTTCGA GCACGGTGGC ATCCAGATCT ACGAGAGTGT CATATCCTTT GCCGACGGTG CACTCCATGA CGTGATCTTT TATAAAGCCA CGTTCACCAC AACAGAAAAA AACATCGGCG GCCTTGTAGG GACCATCCTC GACATTACCG AAAGGAAGCA GACTGAGGAA AGACTTCGTT ACATGAGCAC CCACGACACA CTGACGGGAC TTTACAACCG AGCCTATTTT CAGGAAGAAA TGGAGCGACT TGAGCAGGGA AGGCAATTCC CGGTCAGCGT AGTCGTATTT GACGTGGACC GGCTGAAATA CGTCAATGAC AGCCAGGGAC ACGCTGCGGG GGACGAATTG CTGATTCGAG CTGCCTTGGT GCTCAAAGGC GCCTTCCGTG CCGAAGACGT GGTGGCGAGA ATAGGAGGAG ACGAATTCGC CGTTCTCCTT CCCTCAGCAG ACGCCGATGT AGTGCAGGAA GCCCTGCGAA GAGTGATTGG CAAAATAGAG CAGAGCCAGA CGGAAGACCA TCCTGTTCCC CTCAGTATCT CTTTCGGCGC TGCAACGGCC AGCAAGGGCG ACCGCCTCGA AGAGGTACTC AAGCTTGCCG ACCGTAGAAT GTACGAGAAT AAGTTTAAAA AATGCTGCGT ATTACCTGCA TAA
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Protein sequence | MPPPLRVLIL EDSEDDYFLL VRALKREFDI VPERVDSEES LRANLCEKRW DIVLSDYFMP QFDALAALTL IQSMNLDIPF IIVSGKIGEF EAVKAMKAGA HDYIMKGDYT RLIPAIRREL REAVIRQEQR RTDHELREQL HFRQALIDAI PAPIYFMDTT GIFLGCNKAF EAFSGHTQDE IVGKTIYDLM PPSLAKHTDS ADRELFEHGG IQIYESVISF ADGALHDVIF YKATFTTTEK NIGGLVGTIL DITERKQTEE RLRYMSTHDT LTGLYNRAYF QEEMERLEQG RQFPVSVVVF DVDRLKYVND SQGHAAGDEL LIRAALVLKG AFRAEDVVAR IGGDEFAVLL PSADADVVQE ALRRVIGKIE QSQTEDHPVP LSISFGAATA SKGDRLEEVL KLADRRMYEN KFKKCCVLPA
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