Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU1644 |
Symbol | |
ID | 2687346 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 1802943 |
End bp | 1804622 |
Gene Length | 1680 bp |
Protein Length | 559 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637126325 |
Product | putative ABC transporter ATP-binding protein |
Protein accession | NP_952695 |
Protein GI | 39996744 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCACCG ACAGCACGAA AATCATCTAC ACCATGATGA GGGTGTCCAA GTACTACGAC AAGAAGCCCG TCATCAAGGA CATCTCCCTT TCCTATTTTT ATGGGGCAAA GATCGGTGTC CTGGGTCTCA ACGGCTCGGG CAAGTCGACG CTGCTGCGGA TCATGGCCGG GGTCGACAAA GACTTCAACG GTCAAGCTGT GCTTTCGCCC GGTTACACCG TCGGCTACCT TGAGCAGGAA CCCAAGCTCG ACGAGTCGAA AACCGTCCGT GAAATCGTCG AGGAAGGGTG CCAGGAAACC GTCAATCTCC TGAACGAATT CAACGAAATC ACCGCCGCCT TTGCCGATCC CGACGCTGAT ATGGACAAGC TGCTTGAGCG CCAGGCAGAG GTGCAGGAAA AGCTCGATCA CCTGGATGCC TGGGATCTGG ACTCGCGCCT GGAAATGGCA ATGGATGCCC TGCGCTGCCC CCCCGGCGAC ACGCCGGTGA ACGTTCTGTC CGGCGGCGAG AAGCGCCGCG TGGCTCTGTG CCGCTTGCTC CTTCAAAAGC CCGACATTCT TCTGCTGGAC GAACCAACCA ACCATCTGGA CGCCGAAACC GTCGCCTGGC TGGAACATCA CCTGCAGAGC TACCCCGGGA CGATTATCGC CGTCACCCAC GACCGGTACT TCCTCGACAA CGTTGCCGGC TGGATTCTTG AGCTCGATCG AGGCGAGGGA ATACCCTGGA AGGGCAATTA TTCCTCGTGG CTTGATCAGA AGCAGAACCG CCTGGCTCAG GAGGAAAAGG CGGAGAGTGA ACGCCAGAAG ACCCTGCAGC GCGAGCTCGA GTGGATCAGG ATGAGCCCCA AGGGACGCCA CGCCAAAAGC AAGGCGCGCA TCAGTTCCTA CGAGCAGCTC CTGTCCCAGG AGAGCGAGAG GCGGGCCAAG GACCTGGAGA TCTATATCCC GCCCGGTCCC AGGCTCGGTG ATATCGTCAT CGAGGCTGAC AATGTCTCCA AGGCCTACGG GGACCGCCTG CTGGTCGAGG GGATGAGCTT CCGTCTGCCG CCCGGCGGGA TCGTCGGTGT TATCGGCCCC AACGGAGCGG GCAAAACGAC CCTTTTCCGG ATGATTACCG GTCAGGAGGA GCCTGATGCC GGCACCATAC GCACCGGCGA GACGGTGAAA ATCGCCTACG TGGACCAGAG CCGCGACGCC CTTGATCCGA ACAAGAGTAT CTGGGAAGAA ATCTCCGGCG GCCAGGAGAC GCTTCAGCTC GGCAAGGTGA GTGTCAATTC CCGCGCCTAT GTCTCCCGCT TCAATTTCTC GGGGAGTGAT CAGCAGAAAA AAGTGGGGAT GCTCTCCGGC GGAGAGCGGA ACCGGGTCCA TATAGCAAAG ATGCTCAAGG AGGGAGGAAA CGTCATCCTT CTGGACGAGC CGACCAACGA TCTGGATGTG AACACCATGC GGGCATTGGA AGAAGCTCTG GAAAACTTCG CCGGATGCGC TGTGGTAATC TCCCACGACC GATGGTTCCT CGACCGTATC GCCACCCATA TCCTCGCCTT CGAAGGGGAC AGCCAGGCAG TCTGGTTCGA CGGAAACTAC TCGGAATACG AAGAGGATCG CAAGAAGCGC CTCGGTGCCG CCGCTGACAT GCCGCACCGG ATCAAGTACC GGCAGTTGAC GCGGGTATAA
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Protein sequence | MSTDSTKIIY TMMRVSKYYD KKPVIKDISL SYFYGAKIGV LGLNGSGKST LLRIMAGVDK DFNGQAVLSP GYTVGYLEQE PKLDESKTVR EIVEEGCQET VNLLNEFNEI TAAFADPDAD MDKLLERQAE VQEKLDHLDA WDLDSRLEMA MDALRCPPGD TPVNVLSGGE KRRVALCRLL LQKPDILLLD EPTNHLDAET VAWLEHHLQS YPGTIIAVTH DRYFLDNVAG WILELDRGEG IPWKGNYSSW LDQKQNRLAQ EEKAESERQK TLQRELEWIR MSPKGRHAKS KARISSYEQL LSQESERRAK DLEIYIPPGP RLGDIVIEAD NVSKAYGDRL LVEGMSFRLP PGGIVGVIGP NGAGKTTLFR MITGQEEPDA GTIRTGETVK IAYVDQSRDA LDPNKSIWEE ISGGQETLQL GKVSVNSRAY VSRFNFSGSD QQKKVGMLSG GERNRVHIAK MLKEGGNVIL LDEPTNDLDV NTMRALEEAL ENFAGCAVVI SHDRWFLDRI ATHILAFEGD SQAVWFDGNY SEYEEDRKKR LGAAADMPHR IKYRQLTRV
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