Gene GSU1641 details

Gene Information

• Locus tag: GSU1641
• Symbol: cydB
• ID: 2687350
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: +
• Start bp: 1799871
• End bp: 1800899
• Gene Length: 1029 bp
• Protein Length: 342 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 637126322
• Product: cytochrome d ubiquinol oxidase, subunit II
• Protein accession: NP_952692
• Protein GI: 39996741
• COG category: [C] Energy production and conversion
• COG ID: [COG1294] Cytochrome bd-type quinol oxidase, subunit 2
• TIGRFAM ID: [TIGR00203] cytochrome d oxidase, subunit II (cydB)

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.0465165
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAACTGC AGATTACCTG GTTCGTTCTC TGGGGTGTAC TCTGGGCGGT CTATTTCATG 
CTTGACGGAT TTGTACTCGG CACGGGCATC CTGCACAACG TAATCGCTAA GACCGACGGC 
GAAAAGCGGG TGCTCATCAA CGCCGTGGGA CCGGTCTGGG ACGGCAACGA GGTCTGGCTG 
CTTACCGCAG GCGGTGCAAC TTTTGCCGCA TTTCCGACCA CCTACGCGCT CATGTTCAGC 
TATCTCTACA CAGCGCTTCT GCTGTTGCTC TTCTCTCTCA TCGTCCGCGG TGTGGCCTTT 
GAGTTCCGGG GCAAGGTTGA AAGTGCGACC TGGAAAAAGA CCTGGGACGT GGCTATTCAG 
GTGTCGAGCT TTCTGCCCGC GCTCCTGTTC GGGGTGGCTT TCGGCAATAT CTTCGCCGGC 
CTTCCCATGG ACGCCAACGG CTACCACGGC AGCCTCATTG GTCTGCTAAA TCCCTACGGC 
CTTCTCACTG GGGTACTCTT CGTGCTCCTT TTCACGGTAC ACGGAGCCCT CTACCTCTCG 
GTCAAGTCGG TTGGTGAGCT TAGTGCCCGG GCGAAGGGCG TTGCCGACAA GGTTTGGCCG 
GTGCTCCTGG TGGTTGCGGT GGCATTTCTC GCTTACACGA AATTCGCCAC GAAGCTGTAC 
GATAACTATC TGGCCCAGCC GGTTCTGTTC ATTGTTCCGC TGCTTGCCGT GGCCGGGCTT 
GTCGGCACGC GCCTCTTCTC GGCCAAGGGG GCGACTCTGG CGGCCTTTGC CGCCTCGTGC 
GTGACAGTCC TCATGGTGGC TGCGACCGGC GTGGCAGGGC TCTTCCCGAA CCTGATCCCG 
TCGAGCCTCG ACCCGGCCTA TAGCCTGACC ATTTTCAATT CATCGTCGAG CCCCTATACG 
CTCAAAATCA TGACCGCGGT TGCCCTTATC TTCGTCCCCA TCGTTATCGC CTACAAGATC 
TGGGTGTACC GGATATTCCG GGCCCCGGTC ACTGAGGCAG AAGTTCTTAA CGATACACAC 
GCCTACTGA 

 

Protein sequence

MELQITWFVL WGVLWAVYFM LDGFVLGTGI LHNVIAKTDG EKRVLINAVG PVWDGNEVWL 
LTAGGATFAA FPTTYALMFS YLYTALLLLL FSLIVRGVAF EFRGKVESAT WKKTWDVAIQ 
VSSFLPALLF GVAFGNIFAG LPMDANGYHG SLIGLLNPYG LLTGVLFVLL FTVHGALYLS 
VKSVGELSAR AKGVADKVWP VLLVVAVAFL AYTKFATKLY DNYLAQPVLF IVPLLAVAGL 
VGTRLFSAKG ATLAAFAASC VTVLMVAATG VAGLFPNLIP SSLDPAYSLT IFNSSSSPYT 
LKIMTAVALI FVPIVIAYKI WVYRIFRAPV TEAEVLNDTH AY