| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU1593 |
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| Symbol | pnp |
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| ID | 2687125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | + |
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| Start bp | 1746052 |
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| End bp | 1748145 |
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| Gene Length | 2094 bp |
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| Protein Length | 697 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637126273 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | NP_952644 |
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| Protein GI | 39996693 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.029457 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGAAC ACAAGGTTAA CGTAGAATTC GGTGGGCGGA CCATAACGAT CGCAACGGGC
AAGTGGGCCA AGCAGGCTAG TGGCGCCGTG GTGGTTAGTT GCGGGGACAC CGTGGTTCTC
GTGACTGCCG TAGCAACCAA ATCGGCCCGG GAAGGACAGG ACTTTTTCCC TCTGACGGTG
AATTATCAGG AGAAAGCGTA TGCCGGCGGC AAGATTCCCG GCGGCTTCTT CAAGCGCGAA
GGGCGTCCCT CCGACAACGA GACTCTCACG TCCCGCTTTA TCGATCGTCC GATCCGTCCG
CTTTTCCCTG AGAGTTTTCT GAACGATACC CAGATTATGG CAACTGTCGT CTCGGCGGAC
CAGGATAATG ATCCCGGCAT CCTTGCCATG ATCGGCGCAT CTGCCGCCCT TGAGGTCTCC
GATATTCCGT TCCTCGGCCC CATCGCCGGC GTCAAGGTTG GGCGCGTGGA CGGCCAGTTT
GTATGCAATC CCACGGTAGA GCAACTGGAG AAAAGCGATC TTGAAATCGT TGTTGCGGCG
AGCCGCGATG CGGTCATCAT GGTAGAGGGG GGGGCTGCAG AGGCGTCCGA AAAGGATGTC
CTGGAAGCTA TTTTCTTCGG TCACGCCGCT GTTCAGCCGA TTATCGAGGC CCAAACCGAT
CTCCGGAAGC TGGCTGGCGT TCCCAAGCGC GAGGTTGCGG CCACGTCTGT TGATGAGGCC
CTGAAGACTC GGGTGAAGGA TCTTGCCTAT GCCGGGATCA AGGAGGCCGT CCGGATCGTC
GCCAAGCAGG AGCGTCACAA CCGCATCGGC GAGATCACCG CGCAAACCCT TGAAACACTT
CTGCCCGAGT ATGAAGGACG TGAGTCGGAG ATTAAGGGGT TCCTCGGCGA CTTCGAGTAT
GAACTCGTCC GTGAGCATAT CATCAAGGAC GGCTACCGCA TTGACGGTCG GGACACCACA
ACTATCCGTC CTATCAGCAT TGAGGTCAGC ATGTTGCCGC GTGCCCACGG CTCCGCTCTC
TTCACTCGTG GTGAAACCCA GGCGCTCGTG GCATCGACTC TCGGGACTTC CATTGACGAG
CAGCGGATTG ATTCACTGTA CGGCGAGACC CGCAAGCGCT TCCTCCTTCA CTACAACTTC
CCGCCGTTCT CGGTCGGGGA AACGAGCTTC CGTCTCGCTC CGGGCCGGCG CGAAATCGGC
CACGGCATGC TGGCCGAAAG AGCTCTTGAG CGCGTCGTGC CCAAGCACGA GGATTTTCCG
TACACCATCA GAATTGTCTC CGATATCCTC GAGAGCAACG GTTCCTCCTC CATGGCAACC
GTGTGCGGCG GCGCACTGGC GATGATGGAT GCAGGCGTGC CGATCAAGGC TCCGGTGGCC
GGTATCGCCA TGGGCCTCAT CAAGGAAGGG GAGGGCATCG CCATCCTTTC CGACATTCTC
GGTGATGAGG ATCATCTTGG CGATATGGAT TTCAAGGTGG CCGGCACCGA AGCAGGGGTA
ACCGCCATCC AGATGGACAT CAAGATCACC GGTGTCACCC GCGAGATCAT GGAGAAAGCC
TTGCTGCAGG CCCGTGACGG CAGACTCCAT ATCCTGGGCA AGATGAATCA GGCCATTGCC
GCTCCGCGGA CTGATCTCTC ACCCTATGCT CCCCGCATCA CCACCATCTG GGTCAAGACC
GACAAGATCC GCGACGTCAT CGGGTCAGGA GGAAAGAATA TCCGCGGCAT CACCGAGGCG
ACCGGCGTAT CCATCGATAT CGAGGACAGC GGCCGCATCA ATATTGCCAG CACCAGCAAA
GAAGCCTGCG ACAAGGCTAT CAAGATGATC CGCGACCTCA CGGCCGAGGC CGAAGAGGGT
AAGCTCTACA TGGGCACCGT CAAAAAAGTC ATGGATTTTG GCGCATTCGT GGAGATATTC
CCCGGCACCG ACGGACTTGT CCATATATCC GAACTGGATA CCGAGCGTGT GAAGAACGTG
ACCGACGTTC TCAATGAGGG TGACAAGGTG CTGGTGAAGT GTATCGGCAT AGACAAGCAG
GGCAAGATAA AGCTGTCGCG GAAAGAGGCG CTCGGCGCCG TACTGCCCGA ATAG
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| Protein sequence | MTEHKVNVEF GGRTITIATG KWAKQASGAV VVSCGDTVVL VTAVATKSAR EGQDFFPLTV
NYQEKAYAGG KIPGGFFKRE GRPSDNETLT SRFIDRPIRP LFPESFLNDT QIMATVVSAD
QDNDPGILAM IGASAALEVS DIPFLGPIAG VKVGRVDGQF VCNPTVEQLE KSDLEIVVAA
SRDAVIMVEG GAAEASEKDV LEAIFFGHAA VQPIIEAQTD LRKLAGVPKR EVAATSVDEA
LKTRVKDLAY AGIKEAVRIV AKQERHNRIG EITAQTLETL LPEYEGRESE IKGFLGDFEY
ELVREHIIKD GYRIDGRDTT TIRPISIEVS MLPRAHGSAL FTRGETQALV ASTLGTSIDE
QRIDSLYGET RKRFLLHYNF PPFSVGETSF RLAPGRREIG HGMLAERALE RVVPKHEDFP
YTIRIVSDIL ESNGSSSMAT VCGGALAMMD AGVPIKAPVA GIAMGLIKEG EGIAILSDIL
GDEDHLGDMD FKVAGTEAGV TAIQMDIKIT GVTREIMEKA LLQARDGRLH ILGKMNQAIA
APRTDLSPYA PRITTIWVKT DKIRDVIGSG GKNIRGITEA TGVSIDIEDS GRINIASTSK
EACDKAIKMI RDLTAEAEEG KLYMGTVKKV MDFGAFVEIF PGTDGLVHIS ELDTERVKNV
TDVLNEGDKV LVKCIGIDKQ GKIKLSRKEA LGAVLPE
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