Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU1557 |
Symbol | |
ID | 2687143 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 1711580 |
End bp | 1712404 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637126236 |
Product | mechanosensitive ion channel family protein |
Protein accession | NP_952608 |
Protein GI | 39996657 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.172425 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACACCA TGGGACAGTA TCAGCAGCTG GTTGTCACGT ATGCAACGGT AATCGGGACA AAGATCATCG CCGCCATTTT GTTCTGGGTT GTCGGCCGCT GGCTGATCCA CCTGGTGCAG CGGATGCTTC ATCAGGTTCT GGAGAAGCAG AAAGTCGATC CCAGTCTGAT GCGGTATCTG GGCAACTTCC TCGGAGTGGC TCTGAACATC GTGCTGGTGG TGGCGATACT CGGCTACTTC GGGGTGCAGA CCACCACCTT CGCCGCATTG GTGGCCGGCG TCGGCATTGC CATTGGCGCT GCCTGGGGTG GGCTCCTTTC CAACCTGGCG GCCGGGGCGT TCCTTCTGGT GTTGCGCCCC TTCAAGGTGG GGGATTTCGT CACCGCCGGA GGCATCACCG GCACCGTAAA CGAGATAGGC CTCTTCGTGA CCGCCATCAA TACCCCTGAC AATGTCATGA CCATGGTGGG CAACGCCAAA ATCTTCAACG ATACGATCCA GAACTTTACC ATCAATGACT ATCGCCGAGT GGAACTGAAG TGCCAGCTGG CCGGAAGCGC CGATCACGTG GCAGCGATGG CGCTGCTGCG CGAGAAGCTC GCGACGGTGC CGAATGTGCT GACAACGCCT GCGGTCGATG TGGAGATCCT CGACTTCACC CTGGTGGGTC CGGTGCTCGC CGTGCGCCCT TACTGTCACA ACGACCATTA CTGGCAAGTC TATTTCGACG GCAACCGGAC GATACGCGAA GCCCTCGCCG CGGCGGGATT CCCTGCTCCC ATGCCGGCCC AGGTGGTGCT GGTCCAGAGT CCGCAGGGGG GATGA
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Protein sequence | MDTMGQYQQL VVTYATVIGT KIIAAILFWV VGRWLIHLVQ RMLHQVLEKQ KVDPSLMRYL GNFLGVALNI VLVVAILGYF GVQTTTFAAL VAGVGIAIGA AWGGLLSNLA AGAFLLVLRP FKVGDFVTAG GITGTVNEIG LFVTAINTPD NVMTMVGNAK IFNDTIQNFT INDYRRVELK CQLAGSADHV AAMALLREKL ATVPNVLTTP AVDVEILDFT LVGPVLAVRP YCHNDHYWQV YFDGNRTIRE ALAAAGFPAP MPAQVVLVQS PQGG
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