Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU1554 |
Symbol | |
ID | 2685292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 1705571 |
End bp | 1706740 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637126233 |
Product | GGDEF domain-containing protein |
Protein accession | NP_952605 |
Protein GI | 39996654 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.84144 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGCGAA AGAAGAAAAC CGTCGAAGAC CCCGCGCTGA CCCGTGCCTT GAAGGTCATG GAGGCGGGCG CGTTGCCGGA TGCTGACCTG GCCGCCGAAT TCGCCACCCT GGCCGAGAGT TACGGGAAGC TGCTGCGCAA ATTCAACAAG ACGCTCGTGA TCAGCGATGC CTACGAGGCC CAGCATCAGG CAATGGCCAA GAAGCTGGAG GAGGCCACCT GGAAGTATCG TCAGTTGAAG GATGTGGCGC TCCCGATCTG CATGTACTGC AAGAAGATCC GCTCCGACGA CGACTACTGG CAGCGGCTGG AAACGTTTTT CTGCAACCAT GCCGATATCA TGTTCAGTCA CGGGATCTGC CCGGACTGCA TCAAGACCGC CTATGAGAAG ATGGGGATGA ACAGGAGGGC CATGCCGCTG CCGGATGCTG CCGTGACCGG ACAGCCGGCG GCGTCTCCCG AGCGGCAGCC GGTGGAGGAC GACGCCCTCA GGGAGATGCG GGCGCTGGTG CGCCGGAGTG CCTTTGACGG GAGTCCGGTT GCGCCCGAGG TGGAACAGTT CGTCGAAAAG TACGGCAAGC TGCTGCGCCG CTTCAGCAAG ATCGTCTCCA TCAGCGACAG CTACCAGTCA CAGCTCCGGG AGCTCAACGC CCGGCTGGAG CTGATGGCCC GCACCGATCT TCTCACCGGT CTCGCCAACC ACTGGGAGAT GGTGATGCGA CTGGCAGCGG AGCAGAGTCG TTCGGAGCGA AACGGGAAGG TCTTTTCGAT CGTGCTGGCG GATATCGATC ACTTCAAGAA GGTCAACGAC ACCCACGGGC ACCAGGCCGG CGACCGGGTC ATCCGGGGGA TCGCCGACAC CCTGCGTACC AATATCCGCC GCGAAGACAT CTGCAGCCGG TGGGGAGGGG AGGAGTTCCT CATCATACTG CCGGAGGCGG ATTTGCCGCG GGCCGGGGCC GTGGCGGCGA AGCTCCTCGC CAAGGTGCGG AATACGGTGG TCCCGTGGGA TGGGCGCGAC ATCCGGGTCA CCGTGAGCAT CGGCTATGGC ACCAGCGAAC CCGGCATGAG CGTCGATGAA CTGATCAGGC GAGTCGACGA TGCCCTCTAC AGCGCCAAGG CCGCGGGCCG CGACCGGTTC GCCGCGGCCG GTTCCCGCGC CGACGTCTGA
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Protein sequence | MPRKKKTVED PALTRALKVM EAGALPDADL AAEFATLAES YGKLLRKFNK TLVISDAYEA QHQAMAKKLE EATWKYRQLK DVALPICMYC KKIRSDDDYW QRLETFFCNH ADIMFSHGIC PDCIKTAYEK MGMNRRAMPL PDAAVTGQPA ASPERQPVED DALREMRALV RRSAFDGSPV APEVEQFVEK YGKLLRRFSK IVSISDSYQS QLRELNARLE LMARTDLLTG LANHWEMVMR LAAEQSRSER NGKVFSIVLA DIDHFKKVND THGHQAGDRV IRGIADTLRT NIRREDICSR WGGEEFLIIL PEADLPRAGA VAAKLLAKVR NTVVPWDGRD IRVTVSIGYG TSEPGMSVDE LIRRVDDALY SAKAAGRDRF AAAGSRADV
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