Gene GSU1508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGSU1508 
Symbol 
ID2686110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sulfurreducens PCA 
KingdomBacteria 
Replicon accessionNC_002939 
Strand
Start bp1653235 
End bp1654380 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content39% 
IMG OID637126184 
Producthypothetical protein 
Protein accessionNP_952559 
Protein GI39996608 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3754] Lipopolysaccharide biosynthesis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.261269 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCTCTG TGGGGAAAGG GAAAATCATG ATTACTCCCG ACCACAATAT TATCAAACCT 
ATCGCTATCG TATTACCCCA GTTCCATCCC ATTCGAGAAA ACAATTTATG GTGGGGCGAA
GGTTTCACCG AATGGACTAA TGTCGTTAAG GGGCGACCGC GTTTCCGGGG ACATTACCAG
CCTCATTTGC CGAAAGATCT TGGCTACTAT GACTTGCGAC TACCTGAAAC ACGCAAAGCG
CAAGCTGCTC TCGCAACAAA ATACGGCATC TATGGTTTTT GCTATTATCA TTACTGGTTT
AATGGTCGCC GTATTCTCGA AAGTCCTGTT GACGCAATGT TAGAATCAGG CGAGCCAGAT
TTCCCCTTCA TGCTTTGCTG GGCAAATGAA AATTGGACGA GAAATTGGGA TGGAAGTTAT
AATAAGGTTC TGTTGGAACA AAAGTATTCT AAGGAAGACT TTGTTAATCA TGCACGCCAT
TTGATAAGAT ACTTTAAGGA TGACCGCTAC ATAAAAATTG ATGGTAGACC TGTTTTTGCA
ATCTATAAGG ATGACATAGG AGAAGATATT GAGAAATATC TTCTCCTATT TCGCAATGAA
TTGCTTAAAA ATTCTATCAA CGTATTTTTG TGCAGATTCG AAAGAAATAT CGGGACAAGT
AGGGACTTAA ATAGAGCTTT TCAAGTTTTT GATGCAGGTA TCGAATTTCA GCCTCTTGCT
AGGCAATTTT CTTATTTGAT CAATTATAAT AATAGATTAA GTAGACGCAT TTACAAGACG
TTAAAAAAGC ACTTCTGCTT CTGTAAGAAT ATTGATGATG TATATGTATA TTCACATTTG
GTAGATAATG ACCTTAAATA TGATTTTCAG CAAGGATGGC CAATTTTTCC AGGAGTATGT
CCTGGATGGG ATAACTCTGC TCGTCGCAGA GATACTACAG CGATAATATT CGATAAATCA
ACTCCTGAAA TCTTTAAACT ATGGGTTCGT GAGAAAATTA GAATAACAGA TTGGAATTTG
CTTCCAGAAA GATTTCTTTT TGTAAACGCT TGGAATGAGT GGGCTGAGGG TAACCATCTT
GAACCTTGCG AAAAGTGGGG TACACAGTAT CTGGCTGCTC TTCAGGCGGG CATCAATGAA
ATGTGA
 
Protein sequence
MISVGKGKIM ITPDHNIIKP IAIVLPQFHP IRENNLWWGE GFTEWTNVVK GRPRFRGHYQ 
PHLPKDLGYY DLRLPETRKA QAALATKYGI YGFCYYHYWF NGRRILESPV DAMLESGEPD
FPFMLCWANE NWTRNWDGSY NKVLLEQKYS KEDFVNHARH LIRYFKDDRY IKIDGRPVFA
IYKDDIGEDI EKYLLLFRNE LLKNSINVFL CRFERNIGTS RDLNRAFQVF DAGIEFQPLA
RQFSYLINYN NRLSRRIYKT LKKHFCFCKN IDDVYVYSHL VDNDLKYDFQ QGWPIFPGVC
PGWDNSARRR DTTAIIFDKS TPEIFKLWVR EKIRITDWNL LPERFLFVNA WNEWAEGNHL
EPCEKWGTQY LAALQAGINE M