Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU1508 |
Symbol | |
ID | 2686110 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 1653235 |
End bp | 1654380 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637126184 |
Product | hypothetical protein |
Protein accession | NP_952559 |
Protein GI | 39996608 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3754] Lipopolysaccharide biosynthesis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.261269 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCTCTG TGGGGAAAGG GAAAATCATG ATTACTCCCG ACCACAATAT TATCAAACCT ATCGCTATCG TATTACCCCA GTTCCATCCC ATTCGAGAAA ACAATTTATG GTGGGGCGAA GGTTTCACCG AATGGACTAA TGTCGTTAAG GGGCGACCGC GTTTCCGGGG ACATTACCAG CCTCATTTGC CGAAAGATCT TGGCTACTAT GACTTGCGAC TACCTGAAAC ACGCAAAGCG CAAGCTGCTC TCGCAACAAA ATACGGCATC TATGGTTTTT GCTATTATCA TTACTGGTTT AATGGTCGCC GTATTCTCGA AAGTCCTGTT GACGCAATGT TAGAATCAGG CGAGCCAGAT TTCCCCTTCA TGCTTTGCTG GGCAAATGAA AATTGGACGA GAAATTGGGA TGGAAGTTAT AATAAGGTTC TGTTGGAACA AAAGTATTCT AAGGAAGACT TTGTTAATCA TGCACGCCAT TTGATAAGAT ACTTTAAGGA TGACCGCTAC ATAAAAATTG ATGGTAGACC TGTTTTTGCA ATCTATAAGG ATGACATAGG AGAAGATATT GAGAAATATC TTCTCCTATT TCGCAATGAA TTGCTTAAAA ATTCTATCAA CGTATTTTTG TGCAGATTCG AAAGAAATAT CGGGACAAGT AGGGACTTAA ATAGAGCTTT TCAAGTTTTT GATGCAGGTA TCGAATTTCA GCCTCTTGCT AGGCAATTTT CTTATTTGAT CAATTATAAT AATAGATTAA GTAGACGCAT TTACAAGACG TTAAAAAAGC ACTTCTGCTT CTGTAAGAAT ATTGATGATG TATATGTATA TTCACATTTG GTAGATAATG ACCTTAAATA TGATTTTCAG CAAGGATGGC CAATTTTTCC AGGAGTATGT CCTGGATGGG ATAACTCTGC TCGTCGCAGA GATACTACAG CGATAATATT CGATAAATCA ACTCCTGAAA TCTTTAAACT ATGGGTTCGT GAGAAAATTA GAATAACAGA TTGGAATTTG CTTCCAGAAA GATTTCTTTT TGTAAACGCT TGGAATGAGT GGGCTGAGGG TAACCATCTT GAACCTTGCG AAAAGTGGGG TACACAGTAT CTGGCTGCTC TTCAGGCGGG CATCAATGAA ATGTGA
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Protein sequence | MISVGKGKIM ITPDHNIIKP IAIVLPQFHP IRENNLWWGE GFTEWTNVVK GRPRFRGHYQ PHLPKDLGYY DLRLPETRKA QAALATKYGI YGFCYYHYWF NGRRILESPV DAMLESGEPD FPFMLCWANE NWTRNWDGSY NKVLLEQKYS KEDFVNHARH LIRYFKDDRY IKIDGRPVFA IYKDDIGEDI EKYLLLFRNE LLKNSINVFL CRFERNIGTS RDLNRAFQVF DAGIEFQPLA RQFSYLINYN NRLSRRIYKT LKKHFCFCKN IDDVYVYSHL VDNDLKYDFQ QGWPIFPGVC PGWDNSARRR DTTAIIFDKS TPEIFKLWVR EKIRITDWNL LPERFLFVNA WNEWAEGNHL EPCEKWGTQY LAALQAGINE M
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