Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU1491 |
Symbol | |
ID | 2686142 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 1634843 |
End bp | 1636549 |
Gene Length | 1707 bp |
Protein Length | 568 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637126167 |
Product | type IV pilus biogenesis protein PilB |
Protein accession | NP_952542 |
Protein GI | 39996591 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
TIGRFAM ID | [TIGR02533] general secretory pathway protein E [TIGR02538] type IV-A pilus assembly ATPase PilB |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.10563 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGGCTA GCAGACTGGG AGAACTCCTG GTTCGAAACA ATATCATCAC CAAGGAACAG CTTGCCAAGG CACTGGACGA GCAACGAACC TCCGGCGGCC AACAGCGCCT TGGCTCCATC CTCGTCAAGA ACGGCCTTGT CACTGAGCCC GATCTCACCA CGTTCCTCTC CAAGCAGTAC GGTGTCCCCT CCATCAATCT GAGTGAATTC GAAGCCGATA TGGCGGTGGT CAAGATCATC CCCGCCGACG TGGCCCAGAA GTACCAGATC GTCCCGGTGA ACAGGGCCGG TTCGACCCTG ATCATTGCCA TGGCTGACCC GTCGAACATC TTCGCCATCG ACGACATCAA GTTCATGACC GGCTACAACG TGGAGGTGGT CGTCGCTTCC GAGTCGTCCA TCAAGACTGC CATCGACAAG TACTATGACC AGTCAGCGTC TCTGGCCGAC GTCATGAACG ACCTGGAGAT GGACGATCTG GAGGTTATCG GCGAGGACGA GGATGTAGAC GTTTCTTCCC TCGAACGGGC GACCGAGGAT GCGCCGGTCG TCAAGCTCGT GAACCTGATC CTCACCGACG CCATCAAGAA GAAGGCGAGT GATATCCATA TCGAGCCCTA TGAGCGGACC TTCCGGGTGC GCTATCGGAT CGACGGCGTC CTCTACGAAG TCATGAAGCC CCCCCTGAAA CTGAAAAACG CCATCACGTC GCGGATCAAG ATCATGGCTG ACCTGGATAT TGCCGAACGG CGGCTTCCCC AGGACGGCCG CATCAAGATC AAAATGGGTG GCGGGCAGGA CATGGACTAC CGGGTGTCGG TCCTGCCGAC CCTGTTCGGC GAGAAGGTGG TTCTGCGACT CCTGGACAAG TCGAACCTCC AGCTCGACAT GACCAAGCTG GGCTACGAGC CCACGGCGTT GAGCTACTTC AAGGAGGCGA TTCACAAGCC CTTCGGCATG GTGCTGGTGA CCGGACCCAC GGGGAGCGGC AAGACGGTTT CCCTCTATTC GGCGCTTTCC GAGCTCAACA AGACTACCGA GAACATCTCC ACGGCCGAAG ACCCGGTGGA GTTCAACTTC GCCGGCATCA ACCAGGTGCA GATGCACGAA GATATCGGTC TTACCTTTGC CGCCGCGCTC CGCTCCTTCC TGCGTCAGGA CCCGGACATC ATCATGATCG GAGAGATCCG GGACTTCGAG ACGGCCGAGA TCGCCATCAA GGCTGCGCTT ACCGGTCACT TGGTTCTCTC TACCCTTCAC ACCAACGATG CCCCGGCCAC CATCAACCGG CTGTTGAACA TGGGGGTCGA GCCGTTTCTT GTTGCCTCGG CGGTGAACCT GATTACCGCC CAGCGTCTTG CCCGGCGGGT CTGCTCCGAG TGCAAGGCCG TGGAGGAGAT ACCGATCCAG GCTTTGATCG ATGCAGGCGT CCCTCCCGAG GAAGCTCCTG AATATGTCTG CTTTCGCGGC ACCGGTTGTG CCAAGTGCAA CAACACCGGC TACAAGGGGC GCGTCGGCTT CTATCAGGTA ATGCCCATGC TGGAGGAAAT CAGGGAGCTG ATTCTCAACG GCGCCAATAC GGCCGAAATC AAACGCGAAT CCATGCGCCT GGGCATCAAG ACCATGCGCC AATCGGGCCT GACCAAACTC AAGGAGGGGG TTACCTCCTT TGAGGAGGTG CTACGGGTTA CCGTGGCTGA CGACTAA
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Protein sequence | MQASRLGELL VRNNIITKEQ LAKALDEQRT SGGQQRLGSI LVKNGLVTEP DLTTFLSKQY GVPSINLSEF EADMAVVKII PADVAQKYQI VPVNRAGSTL IIAMADPSNI FAIDDIKFMT GYNVEVVVAS ESSIKTAIDK YYDQSASLAD VMNDLEMDDL EVIGEDEDVD VSSLERATED APVVKLVNLI LTDAIKKKAS DIHIEPYERT FRVRYRIDGV LYEVMKPPLK LKNAITSRIK IMADLDIAER RLPQDGRIKI KMGGGQDMDY RVSVLPTLFG EKVVLRLLDK SNLQLDMTKL GYEPTALSYF KEAIHKPFGM VLVTGPTGSG KTVSLYSALS ELNKTTENIS TAEDPVEFNF AGINQVQMHE DIGLTFAAAL RSFLRQDPDI IMIGEIRDFE TAEIAIKAAL TGHLVLSTLH TNDAPATINR LLNMGVEPFL VASAVNLITA QRLARRVCSE CKAVEEIPIQ ALIDAGVPPE EAPEYVCFRG TGCAKCNNTG YKGRVGFYQV MPMLEEIREL ILNGANTAEI KRESMRLGIK TMRQSGLTKL KEGVTSFEEV LRVTVADD
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