Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU1487 |
Symbol | ribF |
ID | 2687153 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 1630018 |
End bp | 1630986 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637126163 |
Product | riboflavin biosynthesis protein RibF |
Protein accession | NP_952538 |
Protein GI | 39996587 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0196] FAD synthase |
TIGRFAM ID | [TIGR00083] riboflavin kinase/FMN adenylyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.038683 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAATCT TCCGGAGCAT TGACGAAATT CGTGAACCGT TGCCGAGCCC GGTGGTAACC ATCGGCAACT TCGACGGTGT TCATCTCGGC CACCGCGAGA TATTCAGACG GGTCAAGCGT GAGGCCGCGC GACTGGACGG GGTTTCCATG GTGATCACCT TCACCCCCCA TCCACTGAAG GTCCTGGGGC TCCGGAAGGA GTTGCGTCTC ATCAACACCT ATGCCGAGAA GGAGCTTCTT ATCGAAGCGT CAGGGATTGA TTGCCTTCTG ACGATCCCCT TTACCGCCGA GTTCGCTGCC ATCGGCGCCG AACGGTTCGT GGGCGAGATC CTCGTGGGAC GGATCGGGGT GAAGAAGCTC GTCATCGGTT ATGATTACGC CTTTGGCAGG AACCGCGAAG GTGATGTGGC CATGCTCCGG AGGATGGGCG AAGAGCACGG TTTCGAGGTG GAAGTGCTCG AGCAGATCGC CAGCGGCGAA ACGGTGTACA GCAGCAGTGC CGTGCGGCGG ATGATCGCGG CGGGCAATGT TCGTGAGGTG GTCAGCCTGA TCGGCCGGCA CTATTCAGTC GGGGGGACGG TGGTTCACGG CCGCCGGCGC GGGAAGGATC TGGGTTTCCC CACGGCCAAT CTCCGGACCG AAAAGGAATT GATCCCTGCC GCCGGGGTCT ATGCGGTCAA GGTGCGAGTG GACGATACCA TTCGGGACGG GGCCTGCAAT ATCGGCAACA ACCCCACCTT CGGCAATGAA GAGGTGACTG TCGAGGTTCA TATCCTCGAC TTCGACGGTG ACCTCTACGG CAAGGAAATC CGTGTGTATT TCGTGGATCG GGTCCGTGAG GAACTGCGCT ATCCCGATCT CAACGCCCTC AAGGAGGGAA TCAGCCGGGA TGTGGCCCGG TGTCGCGAGC TTCTGGCCGG CGTCTCCATC ATCGAATACC GCGACTATCT CGGTGGTGAC GCAGCGTGA
|
Protein sequence | MKIFRSIDEI REPLPSPVVT IGNFDGVHLG HREIFRRVKR EAARLDGVSM VITFTPHPLK VLGLRKELRL INTYAEKELL IEASGIDCLL TIPFTAEFAA IGAERFVGEI LVGRIGVKKL VIGYDYAFGR NREGDVAMLR RMGEEHGFEV EVLEQIASGE TVYSSSAVRR MIAAGNVREV VSLIGRHYSV GGTVVHGRRR GKDLGFPTAN LRTEKELIPA AGVYAVKVRV DDTIRDGACN IGNNPTFGNE EVTVEVHILD FDGDLYGKEI RVYFVDRVRE ELRYPDLNAL KEGISRDVAR CRELLAGVSI IEYRDYLGGD AA
|
| |