Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU1456 |
Symbol | |
ID | 2686235 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 1594036 |
End bp | 1596453 |
Gene Length | 2418 bp |
Protein Length | 805 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637126130 |
Product | hypothetical protein |
Protein accession | NP_952507 |
Protein GI | 39996556 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGGCA AGCCGCTGAC CGACTATGTG GCTCTCGGAT TCACGGCCCT GGAACGGGGC GACTGCCAGG AGGCGGTCAA CATCTTCCGT CGGGCCCAGG AGACGGGACC GACTGCCCGG AGTTTCGTGG GGCTCGGCCT TGCCTTTCAC CGGCTCGGCG ATCCGCCGGC AGCCCGCTGG GCCTTTGCCA AGGCCCTCGA CCTGGAGCCT GCCGACCGGG ATGCCAACGA GTGGATCGAA CGGATCGGCA GACCTGCCGT GCCGGCGCGG ACCAGCGGGG GCCGCGGATG CCGTTTCCGG GCCGGTGAGG ATTTCCTGCA GATCAAGGAG AATGGTTCCT GGCGCAGGTT CTTCATCAAG GGAATCAACC TGGGGCTGGG CCTGCCGGGG TACTTCCCGG GCGAGTACCC TATTCACCGG GAGACCTATC GCCGGTGGTT CCGGCTCATG GGAGAGCTGG GGGTGAACTC GCTACGGGTC TACGCGGTGC AGTCCCCTGG ATTCTACGAA GCGCTGGCCG ATCATAACGA GCAGGGGGGA CGGCTTTTCC TCTTTCAGGG AATCTGGCTG GAGCTGCCCG AAGATGGCGA TTTCCGCGGC CGGGACTTTC TGGCGTATGC CCATCGGCAG ATTCGCGAGG CGGTGGACTC GGTCTGCGGC AGTGCCGACT TCCCCGAGCG CCCCGGCCTG CCCCACGGTT CCTACCGCCG CGACGTTTCC CCCTGGACTG CCGCCTATGT GGTCGGCCGT GAATGGGAAA GCTGCGCGGT ACGCGCTTTC AACGGGCGCT ACGGCCGCAA GCGGGGCGGT TTTGCCGGCC AGTTCCTGAA GGTTGACGAC GGGCTCCCCT TTGAGCAATG GGCCGCCGAG ATCTGCGACT ACCTCCAATC CTACGAGCAT GCCACCTATG ACTGCACCCA TCCGGTAACC ACCATCAACT GGCCGACACT GGACCCCCTG ACCCATCCGT CGGAGTCCAC CTACGAAGAG GGGCTCATTC GCCAGGGTTT CCAGGTGAAC GTGGACGTCT GCAATGAGGA CGAGGACGTG GAGACCTTTG ATCCCGCGCT CATCGCCTCG CGGCAAGGGG CGGGGTTCTT TGCCACCTAT CACGTCTATC CCTACTATCC CGATTTTCTC AACAACGACT TCCTGGATGT CGAAAACCCC TACCGGGAGT ACCTGAAGCG GCTCAGACGC CACCATGGTC GACAGCCTGT GGTTATCGCC GAGTTCGGGG TGCCGTCGAG CCGTGAGGCA ACTCACTGGC AGCGAGATGG CTGGCATCAT GGCGGTCATG ACGAGGTCTC CCAAGGGAAA ATCAATGGTT ACATGATGGA GGCCATCCGC GACGCGGGGC TGGCCGGGGG GATGCTGTTC AGCTGGTTTG ACGAGTGGTT CAAGCGAAAC TGGGTCTTTC TTCCCTATGA ACTCCCGGCC GAACGCAACC CCTTTTGGTT CAATCACCAG GATGCCGAGC AGACCTACGG CCTCATGGCC GCCTATCCCG GTTATCCCGG CAAGGTCGTG ACCCTGGCCG GACGACGTGA AGAATGGCGT GACGCCTCGC TCCTCCAGGA GAAGAGGGGA GGCGCCCCCC TGCACCGTTT CGGCGACGGC CGCGACGGGG CGCGAACCCT CGTGCGGCTT TCAGCGCGGC ACGATGAGGG ATTTTTCTAT CTCTGCCTCG AAACGGCCGA ACCGGTCGAT TTCAGCGCGG CCCACTACCT GATTGGCCTC AATACCTGTG GGGCGAAGGC GGGGGAGACG CTTCTCCCCT TCGACACCAA CGCCCGAAGC CCGCTGGGGC TCACCTTCCT GATCCATCTG GCCGGCGAGG GCGCGAGCCG CATCCTGGTA AGCCGTTTCT ACGACAAATA TCTCAATGAG GGACTGCCGG TCCGCCCCGT GCCGTCCGAT ACGGGAGAGT GGGTGGTCAT GCAGAACATC ACCAACCACC GCCGCATCAG CAAGGACGGC ACCCGGTTCT ACCCCTCCCG GGTCTTCTCC ATGAGCGGGC TGCGCTTCGG CAGCCTCGAT CCGCAAAGTC CCCGCTTCGA CTCCCTGGCC GACTGGCATG TCTCGGGCAC TCTGATTGAG CTTCGGCTGC CCTGGGGGCT CCTGAACATC ACCGACCCCA GTTCCCGGCA GGTCCTCTGG ATGGCGGAAC AAGGGGGCAA GACCCACACC ACCGACGGCA TTGCCGCCAT CGCGTGTTCT TATCGCCCGT CGGGCGAGGG GCTCGCCGCC CGTCCCACGG GCGGGCGGAC AAATCTGGCC GATTCCTTGC CCGCCGGTCT CGGCTCTGAT GCCGTCCGAC GCTATCAATG GGAGAGGTGG AACCACCCCC TGTACCACAC CTATCTCAAG CGGAGCTACT ACCTCTACCG GGATGTACTC GACCGGATGC CGGAGTGA
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Protein sequence | MTGKPLTDYV ALGFTALERG DCQEAVNIFR RAQETGPTAR SFVGLGLAFH RLGDPPAARW AFAKALDLEP ADRDANEWIE RIGRPAVPAR TSGGRGCRFR AGEDFLQIKE NGSWRRFFIK GINLGLGLPG YFPGEYPIHR ETYRRWFRLM GELGVNSLRV YAVQSPGFYE ALADHNEQGG RLFLFQGIWL ELPEDGDFRG RDFLAYAHRQ IREAVDSVCG SADFPERPGL PHGSYRRDVS PWTAAYVVGR EWESCAVRAF NGRYGRKRGG FAGQFLKVDD GLPFEQWAAE ICDYLQSYEH ATYDCTHPVT TINWPTLDPL THPSESTYEE GLIRQGFQVN VDVCNEDEDV ETFDPALIAS RQGAGFFATY HVYPYYPDFL NNDFLDVENP YREYLKRLRR HHGRQPVVIA EFGVPSSREA THWQRDGWHH GGHDEVSQGK INGYMMEAIR DAGLAGGMLF SWFDEWFKRN WVFLPYELPA ERNPFWFNHQ DAEQTYGLMA AYPGYPGKVV TLAGRREEWR DASLLQEKRG GAPLHRFGDG RDGARTLVRL SARHDEGFFY LCLETAEPVD FSAAHYLIGL NTCGAKAGET LLPFDTNARS PLGLTFLIHL AGEGASRILV SRFYDKYLNE GLPVRPVPSD TGEWVVMQNI TNHRRISKDG TRFYPSRVFS MSGLRFGSLD PQSPRFDSLA DWHVSGTLIE LRLPWGLLNI TDPSSRQVLW MAEQGGKTHT TDGIAAIACS YRPSGEGLAA RPTGGRTNLA DSLPAGLGSD AVRRYQWERW NHPLYHTYLK RSYYLYRDVL DRMPE
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