Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU1420 |
Symbol | tylA |
ID | 2687847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 1557042 |
End bp | 1557725 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637126095 |
Product | hemolysin A |
Protein accession | NP_952472 |
Protein GI | 39996521 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1189] Predicted rRNA methylase |
TIGRFAM ID | [TIGR00478] hemolysin TlyA family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.581192 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGGTC AGGTGGTGGT GAACGATCAC CTGGCGGATA AGGCCGGGCT CCAGGTTCCG GTGGAAGCCG AAATCCGGCT CAAGGGGGAG GACATTCCTT TTGTGAGCCG GGGTGGCCTT AAGCTCGCGA GGGCATTGGA GGAGTTCGGT ATCGATGTCG CGGACATGAC CGCCATTGAC GTGGGTGCTT CCACCGGCGG CTTCACCGAC TGCCTGCTCC AGCGCGGTGC CCGGAAGGTC TATGCCGTTG ACGTGGGGTA CGGTCAACTG GCCTGGAAGC TGCGCCAGGA CTCGCGCGTG GTGAATCTGG AAAAGACGAA CATCCGCTAT CTGGAACCCG GCGCTCTGCC GGAGACACCC GGCTTGGCAG TGATCGATGC GTCCTTCATT TCACTCGACA AGGTCCTGCC CTCCACCCTG CGCCTTATCG GGGAAGAGGG TGTCATTGTC GCCCTCATCA AACCCCAGTT CGAGGTGGGA CGGGGAGAGG TCGGCAAGGG CGGCGTGGTG CGCGACGAGG AGAAGCACCG CCGGGTGATT GCCGACGTCG TGGCCCTTGC AGAAGGATTG GGCCTGATGG TTCTCGGCGT TACCGAGTCT CCCATTCTCG GGCCCAAGGG AAATCGTGAG TTTCTGATCC ACCTTAAAAA GGCGGTTGGG GAGACCCCGC CCCATAACCG GTAA
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Protein sequence | MAGQVVVNDH LADKAGLQVP VEAEIRLKGE DIPFVSRGGL KLARALEEFG IDVADMTAID VGASTGGFTD CLLQRGARKV YAVDVGYGQL AWKLRQDSRV VNLEKTNIRY LEPGALPETP GLAVIDASFI SLDKVLPSTL RLIGEEGVIV ALIKPQFEVG RGEVGKGGVV RDEEKHRRVI ADVVALAEGL GLMVLGVTES PILGPKGNRE FLIHLKKAVG ETPPHNR
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