| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU1298 |
|---|
| Symbol | |
|---|
| ID | 2688093 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | + |
|---|
| Start bp | 1418548 |
|---|
| End bp | 1420254 |
|---|
| Gene Length | 1707 bp |
|---|
| Protein Length | 568 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637125972 |
|---|
| Product | methyl-accepting chemotaxis protein |
|---|
| Protein accession | NP_952351 |
|---|
| Protein GI | 39996400 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGTGGT TCCACAATTT AAAAATTGCA TCTAAGCTGA TAGTTGGTTT TGCTCTTGTT
ACCCTGATAG CTTGTGTTAT AGGAGCTATT GGGATAACAA AAATAATGCA GATAGAAAAA
GCCGATACAG AGATGTATGA GCTAAATGCA AAGCCAATGG GACCTATCCT GACTACAGCT
GTGGCTTTTC AGAGGATCAG GGTCAACTAT CGTGAGATAG CACTGGAACA GACTAATGAA
GGCAAGGTAA AGTTTTCCAA CAGAATTAAA GAGTTGCAAA AGACAATAGA TGACAATTTG
CCCGAAATAG AAAAGTCTCT GAAGTCGGAA GAGACTAAGA AAGCCTACGC AGATATAAAG
GCAGAGTTGG CTAAGTTTGC CCCTCATCTT GACAAGATTG TGGCCCTGGC CATGGATGGG
AAGAATGACC AGGCAGTGGC CTATATGAGG AGTGACTCCG TGGCCGGGAT CGCCCGGTCC
GTGGACGACT CGATTCAGAA ACTCGCTGAC CTGAAAATTG ATCTGGCCAA GAAGAAATCC
GACGCCAATA CCGCCGCCGC CAAGGCTGCG GTGGCGATGA CGGGCATCAT CCTCGTGCTC
GGTGTTGCCC TGGCGGTCGG ACTCGGCATA TTCCTTTCCC GCATCATCAG CCGCCCGCTC
AGATCGGCCG TGGACGTTTC GAACCGCCTG TCGGAAGGAG ACCTGACCGT AACGATCGAA
GCGACGAGCA AGGACGAGAC GGGTCAGCTG CTTGCGGCGA TGCACAACAT GGTAGAGAAG
CTGAAGGGCG TGGTAGCTGA CGTGAAGAGC GCGGCAGACA ACGTTGCCGC TGGCAGCCAG
GAGCTCTCCT CCAGCTCCGA GGAGATGAGC CAGGGAGCCA CCGAGCAGGC GGCCGCGGCC
GAAGAGGCCT CCAGCTCCAT GGAGCAGATG AGCTCCAACA TCCGGCAGAA CGCTGACAAC
GCCACCCAGA CCGAGAAGAT CGCCCTGAAG AGCGCCGCCG ATGCCAAGCA GGGCGGCACG
GCCGTGGCAG AAACCGTCGT GGCCATGAAG GAAATCGCCT CCAAGATCTC GATCATCGAA
GAGATAGCCC GCCAGACGAA CCTGCTGGCG TTGAACGCAG CCATCGAAGC GGCGCGTGCC
GGTGAGCACG GCAAAGGGTT CGCGGTGGTA GCGGCCGAGG TCAGAAAGCT TGCCGAGCGG
AGCCAGAAGG CGGCGGGCGA GATCAGCGAG CTGTCTGCCT CCAGCGTTCA GGTAGCGGAA
GAAGCCGGCG AGATGCTGAC GCGGATCGTG CCGGACATCC AGCGTACCGC GGAATTGGTG
CAGGAGATCA GCGCCGCGTG CAAGGAGCAG GACACGGGAG CGGAGCAGAT CAACAAAGCT
ATCCAGCAGC TTGACCAGGT GATCCAGCAG AACGCCAGCG CCAGCGAAGA GATGGCGTCC
ACCAGCGAAG AGCTGGCCAG CCAGGCCGAA CAGCTGCAGG AAACAATCGC CTTCTTCAAA
ACCGGCGAAC AGGTGGGTTT GGTGCGCAAA GCGGCAGCAG TGCGCCAGTT CGCGGCCAAG
AAAAAGGCAG CGATCCCTCA TCTGGGTCAC GGCACGTCCA ACGGCTACCA CGCCGAACCC
GCGACGTCGC GGAAAGTGGC GGTGGGCGGC GGGGTAGACC TGAACCTGGA CAGCGATCAC
CTTGACGACC AGTTCGAGAA ATTCTAG
|
|---|
| Protein sequence | MTWFHNLKIA SKLIVGFALV TLIACVIGAI GITKIMQIEK ADTEMYELNA KPMGPILTTA
VAFQRIRVNY REIALEQTNE GKVKFSNRIK ELQKTIDDNL PEIEKSLKSE ETKKAYADIK
AELAKFAPHL DKIVALAMDG KNDQAVAYMR SDSVAGIARS VDDSIQKLAD LKIDLAKKKS
DANTAAAKAA VAMTGIILVL GVALAVGLGI FLSRIISRPL RSAVDVSNRL SEGDLTVTIE
ATSKDETGQL LAAMHNMVEK LKGVVADVKS AADNVAAGSQ ELSSSSEEMS QGATEQAAAA
EEASSSMEQM SSNIRQNADN ATQTEKIALK SAADAKQGGT AVAETVVAMK EIASKISIIE
EIARQTNLLA LNAAIEAARA GEHGKGFAVV AAEVRKLAER SQKAAGEISE LSASSVQVAE
EAGEMLTRIV PDIQRTAELV QEISAACKEQ DTGAEQINKA IQQLDQVIQQ NASASEEMAS
TSEELASQAE QLQETIAFFK TGEQVGLVRK AAAVRQFAAK KKAAIPHLGH GTSNGYHAEP
ATSRKVAVGG GVDLNLDSDH LDDQFEKF
|
|---|
| |