Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU1277 |
Symbol | greA |
ID | 2686557 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 1393780 |
End bp | 1394256 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637125951 |
Product | transcription elongation factor GreA |
Protein accession | NP_952330 |
Protein GI | 39996379 |
COG category | [K] Transcription |
COG ID | [COG0782] Transcription elongation factor |
TIGRFAM ID | [TIGR01462] transcription elongation factor GreA |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000293441 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTCACA CCATACCGAT GACCAAGGAA AGCTACGAGG CTCTCCAGGA AGAGCTCAAG CGCCTGATCC GCGAGGAGCG ACCCCGAGTG ATCCAGGACA TCGCCGAGGC CCGGGGCCAC GGCGACCTGT CGGAGAACGC CGAGTACGAT GCGGCCAAAA ACCGCCAGGC CTTCATCGAA GGGCGCATTC TGGAACTCCA GGGTAAGCTT GCCCGGGCCT ATGTGGTGGA CCTGACGGGG ATGAAACCGG ACAAGGTGGT GTTCGGCGCC ACCGTTACCC TCTACGACAC TGCAACCGAA GAAGAGGTCA CCTACAAGAT CGTCGGCGAA GAAGAGGCCG ATATCAAACT CGGCAAGATC TCCTGCACTT CGCCGGTGGG CAAGGCCCTC ATCGGCCATA AGCTCGACGA CAGCGTCAAG ATCAAGGTGC CATCCGGGCT CAAGGAATAC GAAATCATCG ACATCAAGTA CGTCTGA
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Protein sequence | MSHTIPMTKE SYEALQEELK RLIREERPRV IQDIAEARGH GDLSENAEYD AAKNRQAFIE GRILELQGKL ARAYVVDLTG MKPDKVVFGA TVTLYDTATE EEVTYKIVGE EEADIKLGKI SCTSPVGKAL IGHKLDDSVK IKVPSGLKEY EIIDIKYV
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