Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU1222 |
Symbol | |
ID | 2685273 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 1326135 |
End bp | 1327292 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637125896 |
Product | histone deacetylase/AcuC/AphA family protein |
Protein accession | NP_952275 |
Protein GI | 39996324 |
COG category | [B] Chromatin structure and dynamics [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0627011 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCCAGCCA GAACAGCCCT CATATACTCG AACGATTTCG CCCGGTTCAG CTACGGCGAC GATCACCCGT TCAAGATCCA GCGTTTCATT CTCGCCTTTG AGCTCATGCG CGCCTATGGC CTCATGGAGC TTCCGAACGT CAAAATCCTC GACTGCCCCC GAGCTGCGGA AGAGGCACTG CTTACCTTTC ACGCGCCCGA CTATCTCGAT CGTCTCAGGG AATTCAGCGA GTCGGACGAT GCCCGCGCCG ATTTCCGGTA CGGTCTCGGC GATCTGGACA ACCCGGTTTT CCGGGGGCTC TACGACTGGG CACGGCTGGG TGCCGGAGGG ACCATCGAGG CGGCCCGGCT GGTTGCCGAG GAGGGCTATG ACATCGCCTT CAATCTTGCG GGGGGGTGGC ATCACGCCCA TCGGGCCAAG GCATCGGGAT TCTCCTATCT GAACGACGCG GTCGTGGCCA TCAACCTGCT CCTGGAAAAG GGCCTGCGGG TGGCGTACCT CGATATCGAT GCCCACCACG GCGACGGAGT GCAGGAAGCG TTTTACGATA CGGACCGGGT CCTGACCATT TCGATTCACG AGAGCGGCAT GTACTTCTTT CCCGGCACCG GTTTCGAGGG GGAAACCGGC ACCGGCGCGG GCACGGGGTA TTCGGTCAAT ATCCCGCTGG TGGCCCACGC CGACGATGCG CTTTTCATGA AGGCCTTCGA CGAAGTGGCG TTTCCGCTTC TCGCCGCCTA TAATCCCGAC GTCCTCGTGA CTCAACTGGG CGCCGACACC TTCCGTACCG ATCCTCTCAC GCGGCTTGAG GTGACGACTC ATAGCTACAC CTATATCCTG CGCAAGCTCA AGGCGCTCGG CATCCCCTGG GTTGCCGTGG GAGGGGGCGG ATACAACCTG GTCAATGTGG CCAGGGCCTG GACCCTTGCC TGGGGGGTGA TGAACGGGGT CGAACTGCCG CCCCGACTGC CGGATTCGTT TGTGTCGATC ATCGGCCGGC TCGGCTATCC CAACAGGATG CTCCTCGATG CCATGCACTG GGCCCAGGAG GACGACCGCA ACCAGGCACT GGACGCGGTG GAGCGAAGCA TAGCTGTCAT CCGGAAGACG ATTTTTCCGG TGATCATCGG TTCCTATGGC GAGACTTCCG GGGAATGA
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Protein sequence | MPARTALIYS NDFARFSYGD DHPFKIQRFI LAFELMRAYG LMELPNVKIL DCPRAAEEAL LTFHAPDYLD RLREFSESDD ARADFRYGLG DLDNPVFRGL YDWARLGAGG TIEAARLVAE EGYDIAFNLA GGWHHAHRAK ASGFSYLNDA VVAINLLLEK GLRVAYLDID AHHGDGVQEA FYDTDRVLTI SIHESGMYFF PGTGFEGETG TGAGTGYSVN IPLVAHADDA LFMKAFDEVA FPLLAAYNPD VLVTQLGADT FRTDPLTRLE VTTHSYTYIL RKLKALGIPW VAVGGGGYNL VNVARAWTLA WGVMNGVELP PRLPDSFVSI IGRLGYPNRM LLDAMHWAQE DDRNQALDAV ERSIAVIRKT IFPVIIGSYG ETSGE
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