Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU1204 |
Symbol | |
ID | 2688307 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 1308090 |
End bp | 1310183 |
Gene Length | 2094 bp |
Protein Length | 697 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637125878 |
Product | sodium/hydrogen exchanger family protein |
Protein accession | NP_952257 |
Protein GI | 39996306 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0569] K+ transport systems, NAD-binding component [COG4651] Kef-type K+ transport system, predicted NAD-binding component |
TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.944233 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCAAAATG GCACGCTTCA ATGTTCAACA GAGGCTTTTG TGGAATTTCA GATACTGCGT GACATGGAAA TACTTTTCGG GCTGGCGGTC TTTACGGTGG TGCTCCTGCG CCGGCTCATG TTCCCCTCGA TTATCGGTTT TCTCGCCACC GGCATCCTGG CCGGCCCCTC TGCTCTGGGG CTCATCAAGA ATACCCACCA GGTGGAGCAG ATGGCCGAAA TCGGGGTGGT GCTCCTGCTT TTTACCATCG GCATCGAATT CTCGCTCAAG GAGCTGATGC GGATCAAGCA CCTCGTCTTC TGGGGCGGGG GGATGCAGGT AGGGGTAACC ATCGCCATCG TGGCGGCCTT GGCGTTCGCC TTCGGCATAC CGCCCTCCCA GGCCACCTTC TTCGGCTTCC TGGTGGCCCT CTCCAGTACC GCCATCCTCA TGAAGCTGCT CATGGACAAG GGGGAGATGG ACGCCCCCCA CGGTAAGGTG GCGCTCGGCA TCCTGATTTT TCAGGACCTC TGCGTGGTCC CCCTCATGCT CTTCACCCCG TTTCTTGCCG GGGCGGGCAA CGGTTGGACG GGGATACTCC TGGTATCTCT CAAGGCGGTG GCCGTGGTAG TGGTGGCCCA TTTCGGCTCC CGGTTCCTGG TCCCCTGGAT TTTCGAACAG GTAGTCAAGA GCCGCAGCCG CGAACTCTTT ATCCTCACCA TTATCTTTAT CGGCTTCGGT ACGGCCTGGC TCACGGCCCA GGTAGGACTG TCGCTGGCCC TGGGGGCATT CATCGCCGGC CTAGCCATCT CCGAATCGGA GTACAGTCAC CAGGCCCTGG GTGATATCAT CCCGTTCCGC GATGCCTTCA TGAGCCTGTT CTTCATCTCC GTGGGCATGC TGCTCGATCT GTCCGTCCTG GTTCGGCAGC CGGTCCTGGT GGCCTCCCTC GTTCTGACTA TCCTGGTGGT GAAGTTTCTG GTCACGGGCG GAGCGGCCAT GGCCCTCGGC ATCCCGGCCC GGGTCGGCAT CGTCACCGCG CTGGCCCTGG CCCAGATCGG CGAATTCTCC TTCATTCTTT CCCAGACCGG CATGCAGTAC GGTCTCCTCT CCAAGGATAT GTACCAGGTA TTTCTGGCTG CATCGGTAGC CACCATGGCT CTCACTCCGC TTTGCCTCAA GGTGGGTGCG CCGGTGGCGA GTTATCTGGT GGGGGTTTTG CCGACACCCT TGACCCGGGG CCGGGGCGTG CTTCGGGGGA AAGAGAAGAA GCTTTCCCTG ACGGATCATG TAATCGTGGT CGGCTACGGC GTCAACGGCA GGAATCTTTC CCGGGTGCTG AAGGTCCAGA AAATCCCCCA TGTGGTGATC GAAACCAATC CCTTCACGGT CTCCACGGAG AAGAGCAAGG GAACCCGCAT CATGTTCGGC GACGCCACCC GGCCCGAGGT TCTCACCCAC TCAGCCGTGG AGCGCGCGCG CAGCATCGTC ATCGCCATTT CCGATGCGGC CGCCAGCCGC CGGGTCGTGG CCCTGGCGCG GCAGATGAGC CCCACCATCC ACATCATCGT CCGGACCCGC TACATTGCCG AGATGGAGCC CCTGTACAAG CTGGGCGCCA ACGAGGTTGT GCCTGAGGAG TTCGAGACGT CCATCGAGAT ATTCTCCCGG GTTCTGCGCA ACTTCCTCAT CCCCCAGGAC CAGATCGATC AGTGCGTGGG AGAAATTCGG CGGGGTTCCT ACGACATGTT CCGCACCATG AGTCGCCGTC ACAGCCACGC CGTAGGGATC GCCGGGTACC TATCCGGCGC GGAGATCGCT ACCTTCCGCG TGAAGAAGGG AGCCCCCATC GAGGGTGAAA GCCTGCGGCA AGGGACCCTG CGAACCAGGT CGGGCGCCAC GCTCCTGGTG ATCAAGCGGG GGGACGAGGT GACGCCCAAT CCCGACCCGG TCTGGGTCCT GCAGGAGGGG GACATCGTAT TGCTGCTTGG CACGCCGGAG CAACTCGCCG CAGCCTCGCG GCTTTTCGAG GCACCGGCGG TGGAGGGCGG GCCCGTTGCG CCGCCCCCGG CGGATAGCAG CCGACACGAC ACCAGCAACA GGAGAGACCA GTGA
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Protein sequence | MQNGTLQCST EAFVEFQILR DMEILFGLAV FTVVLLRRLM FPSIIGFLAT GILAGPSALG LIKNTHQVEQ MAEIGVVLLL FTIGIEFSLK ELMRIKHLVF WGGGMQVGVT IAIVAALAFA FGIPPSQATF FGFLVALSST AILMKLLMDK GEMDAPHGKV ALGILIFQDL CVVPLMLFTP FLAGAGNGWT GILLVSLKAV AVVVVAHFGS RFLVPWIFEQ VVKSRSRELF ILTIIFIGFG TAWLTAQVGL SLALGAFIAG LAISESEYSH QALGDIIPFR DAFMSLFFIS VGMLLDLSVL VRQPVLVASL VLTILVVKFL VTGGAAMALG IPARVGIVTA LALAQIGEFS FILSQTGMQY GLLSKDMYQV FLAASVATMA LTPLCLKVGA PVASYLVGVL PTPLTRGRGV LRGKEKKLSL TDHVIVVGYG VNGRNLSRVL KVQKIPHVVI ETNPFTVSTE KSKGTRIMFG DATRPEVLTH SAVERARSIV IAISDAAASR RVVALARQMS PTIHIIVRTR YIAEMEPLYK LGANEVVPEE FETSIEIFSR VLRNFLIPQD QIDQCVGEIR RGSYDMFRTM SRRHSHAVGI AGYLSGAEIA TFRVKKGAPI EGESLRQGTL RTRSGATLLV IKRGDEVTPN PDPVWVLQEG DIVLLLGTPE QLAAASRLFE APAVEGGPVA PPPADSSRHD TSNRRDQ
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