Gene GSU1194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGSU1194 
Symbol 
ID2686746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sulfurreducens PCA 
KingdomBacteria 
Replicon accessionNC_002939 
Strand+ 
Start bp1298743 
End bp1299363 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content64% 
IMG OID637125868 
Productamino acid transporter LysE 
Protein accessionNP_952247 
Protein GI39996296 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.00235397 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAATC TCAGTGTGTT CCTTGTTTCC GTTGTCCTCG TCACCGTTGC GCCGGGGCCC 
GATATCATCC AGGTTCTCAC CCGGGGAGTA AGCCAGGGGC GGATGGCCGG CTTGGCTGCC 
GCGGCCGGTT TCAGCACCGG CTGTATCTTC CACACGACCC TGGCGGCAGT GGGGGTGTCG 
GCCCTCATTC GGTCCTCCGA CGTGGCATTC ACCCTGATCA AGCTTGCCGG GGCCTGTTAT 
CTGGTCTACA TCGGCATCGG GGCGCTGCGG AACCGGGGGG CATCCCTGGT GGGCGAGCCG 
GCCGGCTTCG ACGCCTTGGG GGTCATCTAC CGCCAGAGCA TCGTGGCAAA CATCCTCAAT 
CCCAAGGTAA CCCTCTTTTT TCTCGCGTTC CTGCCCCAGT TCGTGTCCCC CGCGTCGGCC 
ACTCCAGGCT TTCAGCTCAT GGGGCTCGGC ATCATCTTCA TGGTCGTCAC CATCATCATC 
TTTGGCTCCG TGGCCCTTTT TGCGGGGCTC ATCGGGGACT GGCTCCGACG TCGGCCTGCC 
GTTGCCGGAC GGCTCCAGGC CCTGGCCGGC GTTACCTTCA TCGGCCTCGG CATCCGCGTG 
GCATTGCCCG ATGTCCGCTG A
 
Protein sequence
MTNLSVFLVS VVLVTVAPGP DIIQVLTRGV SQGRMAGLAA AAGFSTGCIF HTTLAAVGVS 
ALIRSSDVAF TLIKLAGACY LVYIGIGALR NRGASLVGEP AGFDALGVIY RQSIVANILN 
PKVTLFFLAF LPQFVSPASA TPGFQLMGLG IIFMVVTIII FGSVALFAGL IGDWLRRRPA 
VAGRLQALAG VTFIGLGIRV ALPDVR