Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU1161 |
Symbol | |
ID | 2688426 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 1265187 |
End bp | 1266401 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637125835 |
Product | RND family efflux transporter MFP subunit |
Protein accession | NP_952214 |
Protein GI | 39996263 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0203325 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTCATG AGGATCTGCA GAAACTGAAA ATCGACAAAG CGGCGGCACT CCGCCCCGCT GCCCGGCGCA GGCCCCTCTA CTGGATCGGG GCGGCCGTTG CCCTTGCGCT GCTGCTGGTC CTGTTCGCAA CCGGCGTTCT CACTCCGGCC GTGACCGTTG AAACCGGCAC GGTGACCCAG GTGTACCCGT CCCAGACCTT TACCCTGCTC AACGCCAGCG GATACGTGGT GGCCCAGCGT AAGGCGGCCG TTGCTGCGAA GCTCACTGGC CGGCTGGTCT GGCTCGGCGT AGAGGAGGGG AGCAGGGTCC GCAAAGGAGA TGTGCTGGCC CGGCTGGAGA GCGACGATGC CGCTGCCGGC CGGGATCAGG CGGCCGCCAA CCTGGGCACG GCCCGGGCGA GCCTGGACCA GGCCCGGGCC GAGCTGACCG ATGCCAGCCA GGCCTATGAG CGGCAGAAGC AGCTCGTGCG CGAGGGGATC GTGGCAAAGG CCGATTTTGA CGCGGCAGAG GCCCGCTTCC TCCGGGCCCG GGCCGCAGTG ACCGCCGCCG AGTCATCAAT CCGCGCCGCC TCGGCCGCCC TGCGAGGGGC GGAGGTGAAC CTGGAGTATT CCCTCATCCG CGCCCCCTTC GATGCCGTGG TCCTGACCAA GAATGCGGAC GTGGGCGACA TCGTCACCCC CATCGGCGCC GCTGCCGACG CCAAGGCCGC CGTGGTCAGC ATCGCAGACT TGGCATCGCT CCAGGTAGAA GCGGATGTTT CTGAATCCAA CTTGGCCAAG GTCAAGGAGG GACAGCCGTG CGAGATCCAG CTCGACTCTT TGCCGGATGA GCGCTTCCGG GGCTTCGTCC ACATGATCGT CCCCACGGCT GATCGCTCCA AGGCGACAGT TCTGGTGAAG GTCCGCTTTG AGAAACTTGA CCCTCGTATC CTCCCCGAGA TGAGCGCCAA GGTGGCATTT TTGGAGCGGC CGGTGGCCGC GGGGGAAGAG AAGCCGAAGA CCGCCGTGAA TCCTGCCGCC GTGGCCGATC GGGACGGCCG CAAGGTCCTT TTCGTTCTGA AGGGAGACCG GGTGGCCGCC GTGCCCGTGA CCCTCGGCGC CCGCCAGGGA GACATGGTGG AGGTTGTCTC CGGCGCCAAG GCCGGGGACA GGATCGTCGT CAAGCCCCTG GACAAGCTCA AGGACGGCAC CCGCGTCAAA ACGGCGGAGA AGTAG
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Protein sequence | MGHEDLQKLK IDKAAALRPA ARRRPLYWIG AAVALALLLV LFATGVLTPA VTVETGTVTQ VYPSQTFTLL NASGYVVAQR KAAVAAKLTG RLVWLGVEEG SRVRKGDVLA RLESDDAAAG RDQAAANLGT ARASLDQARA ELTDASQAYE RQKQLVREGI VAKADFDAAE ARFLRARAAV TAAESSIRAA SAALRGAEVN LEYSLIRAPF DAVVLTKNAD VGDIVTPIGA AADAKAAVVS IADLASLQVE ADVSESNLAK VKEGQPCEIQ LDSLPDERFR GFVHMIVPTA DRSKATVLVK VRFEKLDPRI LPEMSAKVAF LERPVAAGEE KPKTAVNPAA VADRDGRKVL FVLKGDRVAA VPVTLGARQG DMVEVVSGAK AGDRIVVKPL DKLKDGTRVK TAEK
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